RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 COX14Q96I36 57 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 SLC46A1Q96NT5 459 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 OR2M4Q96R27 311 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 FCRL5Q96RD9 977 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 TRIB3Q96RU7 358 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 ZSCAN5AQ9BUG6 496 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 CAAP1Q9H8G2 361 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 TRIM39Q9HCM9 518 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 SPATS2LQ9NUQ6 558 aaKnown RBP9.54□□□□□ -0.88
CHD7-208ENST00000528280 TAAR2Q9P1P5 351 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 ZNHIT2Q9UHR6 403 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 CD84Q9UIB8 345 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 HYOU1Q9Y4L1 999 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 PCDHB1Q9Y5F3 818 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 ENTPD2Q9Y5L3 495 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 MYLKQ15746 1914 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 COL6A6A6NMZ7 2263 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 hCG_1818297A0A087WSY0 165 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 LOC285095A0A1B0GVY8 99 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 OR5K4A6NMS3 321 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 MIF4GDA9UHW6 222 aaKnown RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 B4DGG1 531 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 H7C0C1 242 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 APOC4-APOC2K7ER74 178 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 ARHGAP6O43182 974 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 NOBOXO60393 691 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 PPFIA2O75334 1257 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 ANXA9O76027 345 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 SLC25A14O95258 325 aaPredicted RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 SOD1P00441 154 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 APOC2P02655 101 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 FUCA1P04066 466 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 MPOP05164 745 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 RPLP0P05388 317 aaKnown RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 PTMAP06454 111 aaKnown RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 PTPN3P26045 913 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 CTNNA2P26232 953 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 CDC25BP30305 580 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 CCKBRP32239 447 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 PTPN7P35236 360 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 ATP5OP48047 213 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 POLD2P49005 469 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 VAV2P52735 878 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 INHBCP55103 352 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 MPP3Q13368 585 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 SQSTM1Q13501 440 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 PRPSAP1Q14558 356 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 PTPRRQ15256 657 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 PCSK7Q16549 785 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 HENMT1Q5T8I9 393 aaKnown RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 ITPRIPL1Q6GPH6 555 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 KDELC2Q7Z4H8 507 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 ZC3H18Q86VM9 953 aaKnown RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 NRROSQ86YC3 692 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 PELI3Q8N2H9 469 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 TRAM1L1Q8N609 369 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 UBL4BQ8N7F7 174 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 TTC13Q8NBP0 860 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 BRSK1Q8TDC3 778 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 LRRN4Q8WUT4 740 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 ATXN7L3BQ96GX2 97 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 DCBLD2Q96PD2 775 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 CMKLR1Q99788 373 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 SPATA16Q9BXB7 569 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 B3GNT4Q9C0J1 378 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 CARD9Q9H257 536 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 STN1Q9H668 368 aaKnown RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 SYNDIG1Q9H7V2 258 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 GRPEL1Q9HAV7 217 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 KLHL8Q9P2G9 620 aaPredicted RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 NFKBIL1Q9UBC1 381 aaPredicted RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 SAE1Q9UBE0 346 aaPredicted RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 AMFRQ9UKV5 643 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 SATB2Q9UPW6 733 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 TMEM98Q9Y2Y6 226 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 AAR2Q9Y312 384 aaKnown RBP9.53□□□□□ -0.88
CHD7-208ENST00000528280 RNF215Q9Y6U7 377 aa9.53□□□□□ -0.88
CHD7-208ENST00000528280 GOLGA6L9A6NEM1 432 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 SOWAHDA6NJG2 315 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 INPP4BO15327 924 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 VEGFDO43915 354 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 KCNJ13O60928 360 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 PMPCBO75439 489 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 ECEL1O95672 775 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 CPNE6O95741 557 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 HLA-DPA1P20036 260 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 HMGCLP35914 325 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 ACTR1BP42025 376 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 CLCNKAP51800 687 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 GEMP55040 296 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 WNT3AP56704 352 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 ACTR1AP61163 376 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 B4GALNT1Q00973 533 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 ZFP36L1Q07352 338 aaKnown RBP9.52□□□□□ -0.89
CHD7-208ENST00000528280 WASHC5Q12768 1159 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 TRA2AQ13595 282 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHD7-208ENST00000528280 GALNT3Q14435 633 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 NR1D2Q14995 579 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 TCEA2Q15560 299 aa9.52□□□□□ -0.89
CHD7-208ENST00000528280 C3orf38Q5JPI3 329 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms