RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 CDH15P55291 814 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 SPOCK1Q08629 439 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 ATG16L1Q676U5 607 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 FAAP20Q6NZ36 180 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 PABPC5Q96DU9 382 aaKnown RBP3.71□□□□□ -1.82
CSDE1-210ENST00000525878 SENP5Q96HI0 755 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-210ENST00000525878 POM121L2Q96KW2 1035 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 PYM1Q9BRP8 204 aaKnown RBP3.71□□□□□ -1.82
CSDE1-210ENST00000525878 H2AFJQ9BTM1 129 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 IFIH1Q9BYX4 1025 aaKnown RBP3.71□□□□□ -1.82
CSDE1-210ENST00000525878 UBXN6Q9BZV1 441 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 INTS2Q9H0H0 1204 aaKnown RBP3.71□□□□□ -1.82
CSDE1-210ENST00000525878 WDR13Q9H1Z4 485 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 PDZD7Q9H5P4 517 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 SLC7A10Q9NS82 523 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 ADPRHL2Q9NX46 363 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 A4GNTQ9UNA3 340 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 CEPT1Q9Y6K0 416 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 SCINQ9Y6U3 715 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 DISP3Q9P2K9 1392 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 UTYO14607 1347 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 A0A0G2JLW4 131 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 A0A1W2PPI3 338 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 ARHGEF9O43307 516 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 GUCY1B2O75343 617 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 EGFP01133 1207 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 TSHBP01222 138 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 HOXB5P09067 269 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 CSF2RAP15509 400 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 NR2C2P49116 596 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 PLIN5Q00G26 463 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 KIR2DS3Q14952 304 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 BRD3Q15059 726 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 ZFP69Q49AA0 526 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 C18orf63Q68DL7 685 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 ANO5Q75V66 913 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 HAPLN4Q86UW8 402 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 ZNF440Q8IYI8 595 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 ENAHQ8N8S7 591 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-210ENST00000525878 NOC3LQ8WTT2 800 aaKnown RBP3.7□□□□□ -1.82
CSDE1-210ENST00000525878 PPP1R13BQ96KQ4 1090 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 ZSCAN31Q96LW9 406 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-210ENST00000525878 TRIM15Q9C019 465 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 LTB4R2Q9NPC1 389 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 MARCH4Q9P2E8 410 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-210ENST00000525878 CNOT7Q9UIV1 285 aaKnown RBP3.7□□□□□ -1.82
CSDE1-210ENST00000525878 HSF4Q9ULV5 492 aa3.7□□□□□ -1.82
CSDE1-210ENST00000525878 COL5A2P05997 1499 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-210ENST00000525878 A0A0J9YWU9 116 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 NCAM2O15394 837 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 PSMC2P35998 433 aaKnown RBP3.69□□□□□ -1.82
CSDE1-210ENST00000525878 APOBEC1P41238 236 aaKnown RBP3.69□□□□□ -1.82
CSDE1-210ENST00000525878 AMPHP49418 695 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 CCR5P51681 352 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 CLDN20P56880 219 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 IRX6P78412 446 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-210ENST00000525878 TDGQ13569 410 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 TMEM187Q14656 261 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 USP41Q3LFD5 358 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 PLEKHM3Q6ZWE6 761 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 LRRC8DQ7L1W4 858 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 ADSSL1Q8N142 457 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 FGF22Q9HCT0 170 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 ACSS1Q9NUB1 689 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-210ENST00000525878 TCP11L1Q9NUJ3 509 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 KLHL20Q9Y2M5 609 aa3.69□□□□□ -1.82
CSDE1-210ENST00000525878 A0A1W2PP11 408 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 PDE9AO76083 593 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 UBA7P41226 1012 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.68□□□□□ -1.82
CSDE1-210ENST00000525878 NFIL3Q16649 462 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 C6orf141Q5SZD1 244 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 DCST1Q5T197 706 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 SIGIRRQ6IA17 410 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 PIWIL4Q7Z3Z4 852 aaKnown RBP3.68□□□□□ -1.82
CSDE1-210ENST00000525878 GPR180Q86V85 440 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 MAP7D3Q8IWC1 876 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 APBB2Q92870 758 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 TMEM181Q9P2C4 612 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 CACNG5Q9UF02 275 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 RASAL2Q9UJF2 1139 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 FBXL2Q9UKC9 423 aa3.68□□□□□ -1.82
CSDE1-210ENST00000525878 FAM90A26D6RGX4 464 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 VCYO14598 125 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 CAVIN2O95810 425 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 COX7A2P14406 83 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 UGT1A1P22309 533 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 HOXA13P31271 388 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-210ENST00000525878 PGM1P36871 562 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 CSRP3P50461 194 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 UFM1P61960 85 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 FOXD4Q12950 439 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-210ENST00000525878 MYLK3Q32MK0 819 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 TCTE1Q5JU00 501 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 RRM2BQ7LG56 351 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 ATG9AQ7Z3C6 839 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 CACNA2D4Q7Z3S7 1137 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 RBM15BQ8NDT2 890 aaKnown RBP3.67□□□□□ -1.82
CSDE1-210ENST00000525878 DDHD1Q8NEL9 900 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms