RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 KRT87PA6NCN2 255 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 MATN2O00339 956 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 C1RP00736 705 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 ANXA11P50995 505 aaKnown RBP10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 PRMT2P55345 433 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 HERC3Q15034 1050 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 SPPL2CQ8IUH8 684 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 SPPL2BQ8TCT7 592 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 RTP4Q96DX8 246 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 SORT1Q99523 831 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 PHF24Q9UPV7 400 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 A0A0G2JLL6 359 aaPredicted RBP10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 COX7A2P14406 83 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 MC4RP32245 332 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 CTNNB1P35222 781 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 GLUD2P49448 558 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 EIF2B2P49770 351 aaKnown RBP10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 PRKAG1P54619 331 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 NR1D2Q14995 579 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 MAPKAPK3Q16644 382 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 AP5B1Q2VPB7 878 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 ZIK1Q3SY52 487 aaPredicted RBP10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 GCNT7Q6ZNI0 430 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 CCDC149Q6ZUS6 474 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 PRRT2Q7Z6L0 340 aaPredicted RBP10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 ZNF276Q8N554 614 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 BORCS5Q969J3 196 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 NACC2Q96BF6 587 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 ASB9Q96DX5 294 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 BTN2A3PQ96KV6 586 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 TBATAQ96M53 351 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 TMEM245Q9H330 911 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 TXNRD2Q9NNW7 524 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 EMCNQ9ULC0 261 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 ARFGEF1Q9Y6D6 1849 aa10.8□□□□□ -0.68
PCDHGA1-202ENST00000517417 OR6C75A6NL08 312 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 HPGDP15428 266 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 PPP2R1BP30154 601 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 PSMD7P51665 324 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 RPL38P63173 70 aaKnown RBP10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 NIPAL4Q0D2K0 466 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 ABRQ12979 859 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 CEACAM7Q14002 265 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 CCL14Q16627 93 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 AFTPHQ6ULP2 937 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 TMEM110Q86TL2 294 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 CIR1Q86X95 450 aaPredicted RBP10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 EID3Q8N140 333 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 SCAMP5Q8TAC9 235 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 SHKBP1Q8TBC3 707 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 LINGO1Q96FE5 620 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 B3GALT6Q96L58 329 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 C12orf42Q96LP6 360 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 ANAPC2Q9UJX6 822 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 FGF1P05230 155 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 COL6A2P12110 1019 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 RPL17P18621 184 aaKnown RBP10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 CCR3P51677 355 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 DSC2Q02487 901 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 FGD3Q5JSP0 725 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 NAPRTQ6XQN6 538 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 TMEM26Q6ZUK4 368 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 TAC4Q86UU9 113 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 DENND6AQ8IWF6 608 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 MAPK15Q8TD08 544 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 SNX27Q96L92 541 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 ACAT2Q9BWD1 397 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 GBA3Q9H227 469 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 RIBC2Q9H4K1 309 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 ZBTB26Q9HCK0 441 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 CNOT6Q9ULM6 557 aaKnown RBP10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 TRAF6Q9Y4K3 522 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 PCDHGC4Q9Y5F7 938 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 E7ENX8 843 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 H3BN98 237 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 VPS4BO75351 444 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 CXCL14O95715 111 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 MAPK9P45984 424 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 PIK3CGP48736 1102 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 CBX3Q13185 183 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 INTS6LQ5JSJ4 861 aaKnown RBP10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 DSG4Q86SJ6 1040 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 TMEM132CQ8N3T6 1108 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 GPR156Q8NFN8 814 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 PCYT2Q99447 389 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 HNRNPABQ99729 332 aaKnown RBP10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 MYOCQ99972 504 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 ZNF696Q9H7X3 374 aa10.79□□□□□ -0.68
PCDHGA1-202ENST00000517417 E9PAM4 449 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 AZIN1O14977 448 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 TAZQ16635 292 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 CLEC6AQ6EIG7 209 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 PLEKHM3Q6ZWE6 761 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 TRIM69Q86WT6 500 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 KRT78Q8N1N4 520 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 FIBCD1Q8N539 461 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 HJURPQ8NCD3 748 aaPredicted RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 TADA1Q96BN2 335 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 CAPNS2Q96L46 248 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms