RNA–Protein interactions for RNA: ENST00000516098.1

RNU6-240P-201, Transcript of RNA, U6 small nuclear 240, pseudogene, humanhuman

BASIC

Gene RNU6-240P, Length 97 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-240P-201ENST00000516098 RFTN1Q14699 578 aaPredicted RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 PUM3Q15397 648 aaKnown RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 TEAD2Q15562 447 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 SMAD1Q15797 465 aaKnown RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 EIF2S3LQ2VIR3 472 aaKnown RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 C15orf32Q32M92 178 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 DCST1Q5T197 706 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 PIWIL4Q7Z3Z4 852 aaKnown RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 GPR180Q86V85 440 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 KCNMB4Q86W47 210 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 CCDC117Q8IWD4 279 aaPredicted RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 KIAA2013Q8IYS2 634 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 ADSSL1Q8N142 457 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 CPXM2Q8N436 756 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 SPATA6LQ8N4H0 392 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 PCDH20Q8N6Y1 951 aaKnown RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 STYXQ8WUJ0 223 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 DNAAF4Q8WXU2 420 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 MASTLQ96GX5 879 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 NSMCE3Q96MG7 304 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 TWNKQ96RR1 684 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 RTP3Q9BQQ7 232 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 HERC2P3Q9BVR0 1158 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 PABPC3Q9H361 631 aaKnown RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 PPP1R3EQ9H7J1 279 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 DDX4Q9NQI0 724 aaKnown RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 ECHDC1Q9NTX5 307 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 TCP11L1Q9NUJ3 509 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 TCEAL9Q9UHQ7 104 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 TUBE1Q9UJT0 475 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 KCND3Q9UK17 655 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 FBXO9Q9UK97 447 aaPredicted RBP0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 POMT2Q9UKY4 750 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 SUFUQ9UMX1 484 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 PCDHGB2Q9Y5G2 931 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 ABCA7Q8IZY2 2146 aa0.91□□□□□ -2.26
RNU6-240P-201ENST00000516098 A0A1W2PPR1 153 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 ANKRD66B4E2M5 251 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 PHOX2AO14813 284 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 SLC22A2O15244 555 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 SPINT2O43291 252 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 TSPAN6O43657 245 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 TRMUO75648 421 aaKnown RBP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 TRIM27P14373 513 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 CD72P21854 359 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 TM4SF4P48230 202 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 HUNKP57058 714 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 CLDN2P57739 230 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 TAS2R38P59533 333 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 CSNK2A1P68400 391 aaPredicted RBP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 MBTD1Q05BQ5 628 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 HLTFQ14527 1009 aaKnown RBP eCLIP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 TCTN1Q2MV58 587 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 SGSM1Q2NKQ1 1148 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 MYLK3Q32MK0 819 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 SLC45A4Q5BKX6 768 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 ARHGEF16Q5VV41 709 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 DUS1LQ6P1R4 473 aaKnown RBP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 C11orf96Q7Z7L8 435 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 ISCA2Q86U28 154 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 LONP2Q86WA8 852 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 RAVER1Q8IY67 606 aaKnown RBP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 SYTL1Q8IYJ3 562 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 C17orf47Q8NEP4 570 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 CSNK2A3Q8NEV1 391 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 PRSS33Q8NF86 280 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 OR5R1Q8NH85 324 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 SCAMP5Q8TAC9 235 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 RAB40AQ8WXH6 277 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 PHF21AQ96BD5 680 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 RNFT2Q96EX2 444 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 GPATCH3Q96I76 525 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 MAGED4Q96JG8 741 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 CNOT6LQ96LI5 555 aaKnown RBP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 ZSCAN31Q96LW9 406 aaPredicted RBP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 PCYT2Q99447 389 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 KRT12Q99456 494 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 PSD2Q9BQI7 771 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 WWTR1Q9GZV5 400 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 TKTL2Q9H0I9 626 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 UPF3AQ9H1J1 476 aaKnown RBP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 KCNN2Q9H2S1 579 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 THEGQ9P2T0 379 aa0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.9□□□□□ -2.27
RNU6-240P-201ENST00000516098 FLT1P17948 1338 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 A0A0G2JNG1 304 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 OR5K3A6NET4 321 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 SH2D7A6NKC9 451 aaPredicted RBP0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 SRRM4A7MD48 611 aaKnown RBP0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 E7EVH7 732 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 BCAT2O15382 392 aaPredicted RBP0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 MGMTP16455 207 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 ANXA7P20073 488 aaKnown RBP0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 NR2F2P24468 414 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 RBM5P52756 815 aaKnown RBP eCLIP0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 LYZP61626 148 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 STARD3Q14849 445 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 KIR2DS5Q14953 304 aa0.89□□□□□ -2.27
RNU6-240P-201ENST00000516098 SGO1Q5FBB7 561 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms