RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PSMB4P28070 264 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 STIP1P31948 543 aaKnown RBP12.68□□□□□ -0.38
CLCN3-210ENST00000515420 ADRA1AP35348 466 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 ADCY8P40145 1251 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 GNPDA1P46926 289 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 RPS6KA1Q15418 735 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 ST3GAL2Q16842 350 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 P3H1Q32P28 736 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 PYCR3Q53H96 274 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 RANBP10Q6VN20 620 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 GLT6D1Q7Z4J2 308 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 NRROSQ86YC3 692 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 GALNT13Q8IUC8 556 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 PHYKPLQ8IUZ5 450 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 TTC30BQ8N4P2 665 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 FAM46DQ8NEK8 389 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 MAPK15Q8TD08 544 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 NXPE2Q96DL1 559 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 DEPDC7Q96QD5 511 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 VPS35Q96QK1 796 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 FAM118BQ9BPY3 351 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 SPATA16Q9BXB7 569 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 C10orf88Q9H8K7 445 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 ARNT2Q9HBZ2 717 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 LZTFL1Q9NQ48 299 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
CLCN3-210ENST00000515420 PPP2R2CQ9Y2T4 447 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 SPO11Q9Y5K1 396 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 USP24Q9UPU5 2620 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 FAM149AA5PLN7 773 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 INPP4BO15327 924 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 NUDT21O43809 227 aaKnown RBP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 MYF5P13349 255 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 CHRNA4P43681 627 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 POLD2P49005 469 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 PDE1BQ01064 536 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 CTBSQ01459 385 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 TARDBPQ13148 414 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 HLTFQ14527 1009 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 RTP5Q14D33 572 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 PARP6Q2NL67 630 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 C14orf28Q4W4Y0 310 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 PERM1Q5SV97 790 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 CERCAMQ5T4B2 595 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 DOK6Q6PKX4 331 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 ARHGEF18Q6ZSZ5 1173 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 TRIM74Q86UV6 250 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 C17orf82Q86X59 251 aaPredicted RBP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 SLC13A5Q86YT5 568 aaPredicted RBP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 SLC25A41Q8N5S1 370 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 CCL4L1Q8NHW4 92 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 CCDC110Q8TBZ0 833 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 PTCD2Q8WV60 388 aaKnown RBP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 GLYATL1Q969I3 302 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 CCDC3Q9BQI4 270 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 FICDQ9BVA6 458 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 DPEP2Q9H4A9 486 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 CCDC86Q9H6F5 360 aaKnown RBP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 TRIM39Q9HCM9 518 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 IL17CQ9P0M4 197 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 TAAR2Q9P1P5 351 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 SIRPGQ9P1W8 387 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 GULP1Q9UBP9 304 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 APPL1Q9UKG1 709 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 R3HDM2Q9Y2K5 976 aaKnown RBP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 TMEM98Q9Y2Y6 226 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 PKP3Q9Y446 797 aa12.67□□□□□ -0.38
CLCN3-210ENST00000515420 OAS3Q9Y6K5 1087 aaKnown RBP12.67□□□□□ -0.38
CLCN3-210ENST00000515420 ACACAQ13085 2346 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 DMXL2Q8TDJ6 3036 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 TCRBV7S2A1N4TA0A589 114 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 TRABD2BA6NFA1 517 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 F5H423 210 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-210ENST00000515420 NTN3O00634 580 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-210ENST00000515420 AURKAO14965 403 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 PSMD3O43242 534 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 NUAK1O60285 661 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 SLC25A14O95258 325 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-210ENST00000515420 ASMTLO95671 621 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 SLC4A1P02730 911 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 ATP1A1P05023 1023 aaKnown RBP12.66□□□□□ -0.38
CLCN3-210ENST00000515420 SPAM1P38567 509 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 CLCNKAP51800 687 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 TAF1AQ15573 450 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-210ENST00000515420 OASLQ15646 514 aaKnown RBP12.66□□□□□ -0.38
CLCN3-210ENST00000515420 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 RBM44Q6ZP01 1051 aaKnown RBP12.66□□□□□ -0.38
CLCN3-210ENST00000515420 PROSER1Q86XN7 944 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 FAM71DQ8N9W8 422 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 BLOC1S5Q8TDH9 187 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 ZDHHC1Q8WTX9 485 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 MAIP1Q8WWC4 291 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 CCDC74AQ96AQ1 378 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 TBL1YQ9BQ87 522 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 TMEM121Q9BTD3 319 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 LRRC40Q9H9A6 602 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 SPATS2LQ9NUQ6 558 aaKnown RBP12.66□□□□□ -0.38
CLCN3-210ENST00000515420 ZKSCAN5Q9Y2L8 839 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 GPSM3Q9Y4H4 160 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms