RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SLC2A4P14672 509 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 UCHL3P15374 230 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 CHRNB2P17787 502 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 ZNF143P52747 638 aaPredicted RBP10.83□□□□□ -0.68
DDX41-216ENST00000513562 FMO1Q01740 532 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 IL10RBQ08334 325 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 CHAF1BQ13112 559 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 LAMB3Q13751 1172 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 KIR2DS5Q14953 304 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 PTPRRQ15256 657 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 CHRNA6Q15825 494 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
DDX41-216ENST00000513562 RFLNAQ6ZTI6 216 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 ZNF765Q7L2R6 523 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 NLRP8Q86W28 1048 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 AVL9Q8NBF6 648 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 C3orf20Q8ND61 904 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 PDCD6IPQ8WUM4 868 aaKnown RBP10.83□□□□□ -0.68
DDX41-216ENST00000513562 SCRN2Q96FV2 425 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 ELMO2Q96JJ3 720 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 RUFY1Q96T51 708 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 SELENOOQ9BVL4 669 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 ING2Q9H160 280 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 ABCG8Q9H221 673 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 NDST4Q9H3R1 872 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 UCK1Q9HA47 277 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 LUZP4Q9P127 313 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 VPS18Q9P253 973 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 CPNE7Q9UBL6 633 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 CD84Q9UIB8 345 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 SLC5A6Q9Y289 635 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 ZNF451Q9Y4E5 1061 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 CSMD2Q7Z408 3487 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 ARHGEF17Q96PE2 2063 aaPredicted RBP10.82□□□□□ -0.68
DDX41-216ENST00000513562 OR5K4A6NMS3 321 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 DFFAO00273 331 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 DPM1O60762 260 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 CEACAM4O75871 244 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 PYGLP06737 847 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 UNGP13051 313 aaPredicted RBP10.82□□□□□ -0.68
DDX41-216ENST00000513562 CCL11P51671 97 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 UBE2IP63279 158 aaKnown RBP10.82□□□□□ -0.68
DDX41-216ENST00000513562 SLC10A7Q0GE19 358 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 TRAF2Q12933 501 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 LBRQ14739 615 aaKnown RBP10.82□□□□□ -0.68
DDX41-216ENST00000513562 VWA3BQ502W6 1294 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 MIIPQ5JXC2 388 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 TMCO4Q5TGY1 634 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 SLC6A19Q695T7 634 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 TRIM72Q6ZMU5 477 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 USP45Q70EL2 814 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 CHST15Q7LFX5 561 aaPredicted RBP10.82□□□□□ -0.68
DDX41-216ENST00000513562 PRSS42Q7Z5A4 293 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 SYVN1Q86TM6 617 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 PPP1R3BQ86XI6 285 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 SLC34A3Q8N130 599 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 NPWQ8N729 165 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 SCAMP4Q969E2 229 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 PNPLA2Q96AD5 504 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 C5orf34Q96MH7 638 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 ZNF599Q96NL3 588 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 TGM7Q96PF1 710 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 NUDCD1Q96RS6 583 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 AGAP2Q99490 1192 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 GPR87Q9BY21 358 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 STK33Q9BYT3 514 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 NOD2Q9HC29 1040 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 SLAMF7Q9NQ25 335 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 ACSS2Q9NR19 701 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 ZNHIT2Q9UHR6 403 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 KCNK6Q9Y257 313 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 PPIL1Q9Y3C6 166 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 PRKAB1Q9Y478 270 aa10.82□□□□□ -0.68
DDX41-216ENST00000513562 A0A0U1RQS6 177 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 TCRBV5S1A1TA0A578 114 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 ARGFXA6NJG6 315 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 SIGLEC16A6NMB1 481 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 EEF2KO00418 725 aaKnown RBP10.81□□□□□ -0.68
DDX41-216ENST00000513562 SNX2O60749 519 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 UBXN7O94888 489 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 PGLSO95336 258 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 TIAF1O95411 115 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 CBX6O95503 412 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 ACP5P13686 325 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 PTPN4P29074 926 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 HSPA9P38646 679 aaKnown RBP10.81□□□□□ -0.68
DDX41-216ENST00000513562 NSFP46459 744 aaKnown RBP10.81□□□□□ -0.68
DDX41-216ENST00000513562 LEPRP48357 1165 aaKnown RBP10.81□□□□□ -0.68
DDX41-216ENST00000513562 SEPHS1P49903 392 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 RPS18P62269 152 aaKnown RBP10.81□□□□□ -0.68
DDX41-216ENST00000513562 IL10RAQ13651 578 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 ZNF235Q14590 738 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 NR6A1Q15406 480 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 ZRANB3Q5FWF4 1079 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 LRRC66Q68CR7 880 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 HPS6Q86YV9 775 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 PGBD5Q8N414 524 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 TTC13Q8NBP0 860 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 EXD1Q8NHP7 514 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 KLHL6Q8WZ60 621 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms