RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ANKUB1A6NFN9 424 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 C21orf140B9A014 251 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 PES1O00541 588 aaKnown RBP11.07□□□□□ -0.64
RNF4-218ENST00000513284 HTRA2O43464 458 aaPredicted RBP11.07□□□□□ -0.64
RNF4-218ENST00000513284 DNAJC6O75061 913 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 PTPN4P29074 926 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 CASP14P31944 242 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 VIPR1P32241 457 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 PTGIRP43119 386 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 PTPN9P43378 593 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 ITGA1P56199 1179 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 NOMO3P69849 1222 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 CHRNA6Q15825 494 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 TAF3Q5VWG9 929 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 RAET1GQ6H3X3 334 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 ARHGAP36Q6ZRI8 547 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 SLFN11Q7Z7L1 901 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 NOP9Q86U38 636 aaKnown RBP11.07□□□□□ -0.64
RNF4-218ENST00000513284 PLXDC1Q8IUK5 500 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 ADAMTS17Q8TE56 1095 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 FAM172AQ8WUF8 416 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 COX14Q96I36 57 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 CELF6Q96J87 481 aaKnown RBP11.07□□□□□ -0.64
RNF4-218ENST00000513284 SMIM14Q96QK8 99 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 ABCG8Q9H221 673 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 NDST4Q9H3R1 872 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 ACSS2Q9NR19 701 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 CD84Q9UIB8 345 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 LNPEPQ9UIQ6 1025 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 NTNG1Q9Y2I2 539 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 PCDHGC4Q9Y5F7 938 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 PCDHGB7Q9Y5F8 929 aa11.07□□□□□ -0.64
RNF4-218ENST00000513284 MTORP42345 2549 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 DNHD1Q96M86 4753 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 NPIPB15A6NHN6 443 aaPredicted RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 CREB3O43889 395 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 DPM1O60762 260 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 PALMO75781 387 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 LSM8O95777 96 aaKnown RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 TPM2P07951 284 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 MMEP08473 750 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 TYRP1P17643 537 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 VARSP26640 1264 aaKnown RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 SDC4P31431 198 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 RFC1P35251 1148 aaPredicted RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 NOP2P46087 812 aaKnown RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 SCNN1BP51168 640 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 UBE2IP63279 158 aaKnown RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 LRP8Q14114 963 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 CAMK4Q16566 473 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
RNF4-218ENST00000513284 VWA3BQ502W6 1294 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 NAA35Q5VZE5 725 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 PWWP2BQ6NUJ5 590 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 ADAMTSL4Q6UY14 1074 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 KLHL6Q8WZ60 621 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 SCAMP4Q969E2 229 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 SH3KBP1Q96B97 665 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 PLEKHG4BQ96PX9 1271 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 GPR87Q9BY21 358 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 KCTD5Q9NXV2 234 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 SCHIP1Q9P0W5 487 aaPredicted RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 CPNE7Q9UBL6 633 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 ZNHIT2Q9UHR6 403 aa11.06□□□□□ -0.64
RNF4-218ENST00000513284 CNOT6Q9ULM6 557 aaKnown RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 FARSAQ9Y285 508 aaKnown RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 DIDO1Q9BTC0 2240 aaKnown RBP11.06□□□□□ -0.64
RNF4-218ENST00000513284 GOLGA6CA6NDK9 693 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 GOLGA6BA6NDN3 693 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 ZNF185O15231 689 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 LRCH4O75427 683 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 ATP1A1P05023 1023 aaKnown RBP11.05□□□□□ -0.64
RNF4-218ENST00000513284 GOLGA6DP0CG33 693 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 LPOP22079 712 aaPredicted RBP11.05□□□□□ -0.64
RNF4-218ENST00000513284 MMP8P22894 467 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 GPR1P46091 355 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 PTSQ03393 145 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 PTP4A2Q12974 167 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 FAM69BQ5VUD6 431 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 LCN10Q6JVE6 187 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 CHST15Q7LFX5 561 aaPredicted RBP11.05□□□□□ -0.64
RNF4-218ENST00000513284 SYVN1Q86TM6 617 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 NLRP8Q86W28 1048 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 ZNF677Q86XU0 584 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 GALNT13Q8IUC8 556 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 ARHGAP12Q8IWW6 846 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 PGBD5Q8N414 524 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 INPP5DQ92835 1189 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 SCRN2Q96FV2 425 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 TGM7Q96PF1 710 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 SMAD5Q99717 465 aaKnown RBP11.05□□□□□ -0.64
RNF4-218ENST00000513284 TUBGCP2Q9BSJ2 902 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 EPB41L1Q9H4G0 881 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 GOLGA6AQ9NYA3 693 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 ZNF624Q9P2J8 865 aaPredicted RBP11.05□□□□□ -0.64
RNF4-218ENST00000513284 FZD10Q9ULW2 581 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 KCNK6Q9Y257 313 aa11.05□□□□□ -0.64
RNF4-218ENST00000513284 LILRA5A6NI73 299 aa11.04□□□□□ -0.64
RNF4-218ENST00000513284 A6NL46 340 aa11.04□□□□□ -0.64
RNF4-218ENST00000513284 PSMD11O00231 422 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms