RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 NFE2L3Q9Y4A8 694 aa5.65□□□□□ -1.5
GYPB-212ENST00000511198 NSD1Q96L73 2696 aaPredicted RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 A0A1W2PQF6 199 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 MEI4A8MW99 385 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 CDRT15L2A8MXV6 281 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 H7C1Q1 480 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 DDX39AO00148 427 aaKnown RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 RNF113AO15541 343 aaKnown RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 ZNF217O75362 1048 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 LETM1O95202 739 aaPredicted RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 TPM3P06753 285 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 DLDP09622 509 aaKnown RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 RARGP13631 454 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 GABRR2P28476 465 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 SLC7A1P30825 629 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 ASIC1P78348 528 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 ELAVL2Q12926 359 aaKnown RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 GRIK3Q13003 919 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 RAB32Q13637 225 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 NAB2Q15742 525 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 NFE2Q16621 373 aaPredicted RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 DCAF12L1Q5VU92 463 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 FCRL6Q6DN72 434 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 SLC18B1Q6NT16 456 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 ZDHHC24Q6UX98 284 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 MICU3Q86XE3 530 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 MPP5Q8N3R9 675 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 TERB1Q8NA31 727 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 PNLDC1Q8NA58 520 aaKnown RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 OR56A3Q8NH54 315 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 IGSF8Q969P0 613 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 ERLEC1Q96DZ1 483 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 DAZAP1Q96EP5 407 aaKnown RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 PRR25Q96S07 402 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 ZNF518BQ9C0D4 1074 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 TSPY26PQ9H489 355 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 DCTPP1Q9H773 170 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 AGO4Q9HCK5 861 aaKnown RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 ERRFI1Q9UJM3 462 aaPredicted RBP5.64□□□□□ -1.51
GYPB-212ENST00000511198 VPS4AQ9UN37 437 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 SATB2Q9UPW6 733 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 TBC1D30Q9Y2I9 924 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 MEGF8Q7Z7M0 2845 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 VPS13CQ709C8 3753 aa5.64□□□□□ -1.51
GYPB-212ENST00000511198 ESPL1Q14674 2120 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 KLRF2D3W0D1 207 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 IPO5O00410 1097 aaKnown RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 FPR3P25089 353 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 RBMS1P29558 406 aaKnown RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 PRKAG1P54619 331 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 POLE2P56282 527 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 E2F1Q01094 437 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 CYP4A11Q02928 519 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 DMTNQ08495 405 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 CUL4AQ13619 759 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 KLF9Q13886 244 aaPredicted RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 EIF2S3LQ2VIR3 472 aaKnown RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 RNASE12Q5GAN4 147 aaKnown RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 TPGS2Q68CL5 300 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 APOA5Q6Q788 366 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 DPY19L3Q6ZPD9 716 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 DNAJB7Q7Z6W7 309 aaPredicted RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 ZNF410Q86VK4 478 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 RHPN2Q8IUC4 686 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 CMTM8Q8IZV2 173 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 GPT2Q8TD30 523 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 SAP25Q8TEE9 199 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 PIBF1Q8WXW3 757 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 SNX18Q96RF0 628 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 MXRA8Q9BRK3 442 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 DPCDQ9BVM2 203 aaPredicted RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 GPR174Q9BXC1 333 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 LINC00597Q9H2U6 94 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 NXF3Q9H4D5 531 aaKnown RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 CPNE7Q9UBL6 633 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 ENTPD4Q9Y227 616 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 YIPF1Q9Y548 306 aa5.63□□□□□ -1.51
GYPB-212ENST00000511198 MYO18AQ92614 2054 aaKnown RBP5.63□□□□□ -1.51
GYPB-212ENST00000511198 MYH9P35579 1960 aaKnown RBP5.62□□□□□ -1.51
GYPB-212ENST00000511198 BAZ2BQ9UIF8 2168 aaKnown RBP5.62□□□□□ -1.51
GYPB-212ENST00000511198 A0A1B0GTQ1 180 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 TCRBV5S1A1TA0A578 114 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 A6NNZ2 444 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 FAM227AF5H4B4 570 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 POC1B-GALNT4F8VUJ3 575 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 AP4M1O00189 453 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 PTGESO14684 152 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 EXOC3O60645 756 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 CSO75390 466 aaKnown RBP5.62□□□□□ -1.51
GYPB-212ENST00000511198 SCGB1D2O95969 90 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 PTMAP06454 111 aaKnown RBP5.62□□□□□ -1.51
GYPB-212ENST00000511198 CKMT2P17540 419 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 ACP1P24666 158 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 TNFSF9P41273 254 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 BRCC3P46736 316 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 BCAT1P54687 386 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 CNN3Q15417 329 aaKnown RBP5.62□□□□□ -1.51
GYPB-212ENST00000511198 MINDY4Q4G0A6 757 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 C3orf38Q5JPI3 329 aa5.62□□□□□ -1.51
GYPB-212ENST00000511198 CERCAMQ5T4B2 595 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms