RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 SGF29Q96ES7 293 aa12.54□□□□□ -0.4
KDM3B-206ENST00000509468 AHCYL2Q96HN2 611 aaKnown RBP12.54□□□□□ -0.4
KDM3B-206ENST00000509468 CCDC42Q96M95 316 aa12.54□□□□□ -0.4
KDM3B-206ENST00000509468 SMIM14Q96QK8 99 aa12.54□□□□□ -0.4
KDM3B-206ENST00000509468 SRPK1Q96SB4 655 aaKnown RBP12.54□□□□□ -0.4
KDM3B-206ENST00000509468 SLC38A3Q99624 504 aa12.54□□□□□ -0.4
KDM3B-206ENST00000509468 NUDT22Q9BRQ3 303 aa12.54□□□□□ -0.4
KDM3B-206ENST00000509468 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
KDM3B-206ENST00000509468 STN1Q9H668 368 aaKnown RBP12.54□□□□□ -0.4
KDM3B-206ENST00000509468 ZFYVE1Q9HBF4 777 aa12.54□□□□□ -0.4
KDM3B-206ENST00000509468 RAD18Q9NS91 495 aa12.54□□□□□ -0.4
KDM3B-206ENST00000509468 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
KDM3B-206ENST00000509468 IGHV1OR21-1A0A087WYE8 117 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 LRRD1A4D1F6 860 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 OR5K4A6NMS3 321 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 C9orf172C9J069 976 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.53□□□□□ -0.4
KDM3B-206ENST00000509468 KCNK1O00180 336 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 AGRPO00253 132 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 APOL1O14791 398 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 DNAJC6O75061 913 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 MTA2O94776 668 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 ITGB2P05107 769 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 MMP2P08253 660 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 SLC2A4P14672 509 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 ETV5P41161 510 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 SLC1A1P43005 524 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 AP1B1Q10567 949 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 LY6DQ14210 128 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 HENMT1Q5T8I9 393 aaKnown RBP12.53□□□□□ -0.4
KDM3B-206ENST00000509468 LRRC38Q5VT99 294 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 NKAIN2Q5VXU1 208 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 TMEM71Q6P5X7 295 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 BZW1Q7L1Q6 419 aaKnown RBP12.53□□□□□ -0.4
KDM3B-206ENST00000509468 CHST15Q7LFX5 561 aaPredicted RBP12.53□□□□□ -0.4
KDM3B-206ENST00000509468 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 TRIM74Q86UV6 250 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 NT5DC3Q86UY8 548 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 ZFAND4Q86XD8 727 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 DTX1Q86Y01 620 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 SFRP1Q8N474 314 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 CNTD1Q8N815 330 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 OR10G6Q8NH81 332 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 LRRN4Q8WUT4 740 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 CCDC74BQ96LY2 380 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 ASPSCR1Q9BZE9 553 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 NHEJ1Q9H9Q4 299 aaPredicted RBP12.53□□□□□ -0.4
KDM3B-206ENST00000509468 MAGEE1Q9HCI5 957 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 CNOT6Q9ULM6 557 aaKnown RBP12.53□□□□□ -0.4
KDM3B-206ENST00000509468 PCDHGA3Q9Y5H0 932 aa12.53□□□□□ -0.4
KDM3B-206ENST00000509468 KALRNO60229 2985 aa12.52□□□□□ -0.4
KDM3B-206ENST00000509468 ATMQ13315 3056 aa12.52□□□□□ -0.4
KDM3B-206ENST00000509468 TRBV23OR9-2A0A075B6M9 112 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 GPR89AB7ZAQ6 455 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 B8ZZF3 427 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 STMND1H3BQB6 276 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.41
KDM3B-206ENST00000509468 ATP1A1P05023 1023 aaKnown RBP12.52□□□□□ -0.41
KDM3B-206ENST00000509468 GPR89BP0CG08 455 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 FGF3P11487 239 aaPredicted RBP12.52□□□□□ -0.41
KDM3B-206ENST00000509468 SFTPCP11686 197 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 CCL4P13236 92 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 PLA2G2AP14555 144 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 NR2C2P49116 596 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 PPM1FP49593 454 aaPredicted RBP12.52□□□□□ -0.41
KDM3B-206ENST00000509468 SLC9A4Q6AI14 798 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 IYDQ6PHW0 289 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.41
KDM3B-206ENST00000509468 SLC9B2Q86UD5 537 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 PLD5Q8N7P1 536 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 AVL9Q8NBF6 648 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 RCBTB1Q8NDN9 531 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 IMP4Q96G21 291 aaKnown RBP12.52□□□□□ -0.41
KDM3B-206ENST00000509468 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 WDR24Q96S15 920 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 CHP1Q99653 195 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 ARHGAP9Q9BRR9 750 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 HERPUD2Q9BSE4 406 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.52□□□□□ -0.41
KDM3B-206ENST00000509468 SLC25A51Q9H1U9 297 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 CARD9Q9H257 536 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 TRIM39Q9HCM9 518 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 DDX56Q9NY93 547 aaKnown RBP12.52□□□□□ -0.41
KDM3B-206ENST00000509468 PDP2Q9P2J9 529 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 INTUQ9ULD6 942 aa12.52□□□□□ -0.41
KDM3B-206ENST00000509468 KIR2DS5A0A0G2JLQ3 304 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 A0A0G2JNG1 304 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 C3orf70A6NLC5 250 aaPredicted RBP12.51□□□□□ -0.41
KDM3B-206ENST00000509468 KIR2DS3K7RE56 304 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 GRID2O43424 1007 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 DUX1O43812 170 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 NUAK1O60285 661 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 SLC25A14O95258 325 aaPredicted RBP12.51□□□□□ -0.41
KDM3B-206ENST00000509468 ATP1A2P50993 1020 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 CDK18Q07002 472 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 KIR2DS5Q14953 304 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 TCEAL1Q15170 157 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 SLC14A2Q15849 920 aa12.51□□□□□ -0.41
KDM3B-206ENST00000509468 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.51□□□□□ -0.41
KDM3B-206ENST00000509468 DCAF12Q5T6F0 453 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms