RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ADAMTSL4Q6UY14 1074 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 RFLNAQ6ZTI6 216 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 LYSMD3Q7Z3D4 306 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 GLT6D1Q7Z4J2 308 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 GLRX5Q86SX6 157 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 LINC00523Q86TU6 105 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 HEATR4Q86WZ0 1026 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 HID1Q8IV36 788 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 PHACTR4Q8IZ21 702 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 SDR16C5Q8N3Y7 309 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 SLC25A45Q8N413 288 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 RASGEF1CQ8N431 466 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 FSTL5Q8N475 847 aaPredicted RBP7.23□□□□□ -1.25
GYPB-206ENST00000506516 BRSK1Q8TDC3 778 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 ACTRT1Q8TDG2 376 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 BLOC1S5Q8TDH9 187 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 LMX1AQ8TE12 382 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 ATG4AQ8WYN0 398 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 SCAMP4Q969E2 229 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 TSACCQ96A04 125 aaPredicted RBP7.23□□□□□ -1.25
GYPB-206ENST00000506516 HIC2Q96JB3 615 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 TBATAQ96M53 351 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 OSBPL9Q96SU4 736 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 TBL1YQ9BQ87 522 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 RIOK2Q9BVS4 552 aaKnown RBP7.23□□□□□ -1.25
GYPB-206ENST00000506516 LRRC40Q9H9A6 602 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 NCKIPSDQ9NZQ3 722 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 SCHIP1Q9P0W5 487 aaPredicted RBP7.23□□□□□ -1.25
GYPB-206ENST00000506516 PAK5Q9P286 719 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 FTSJ1Q9UET6 329 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 APOBEC3BQ9UH17 382 aaKnown RBP7.23□□□□□ -1.25
GYPB-206ENST00000506516 MOSPD1Q9UJG1 213 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 PYCARDQ9ULZ3 195 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 SNX12Q9UMY4 172 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 APOBEC2Q9Y235 224 aaKnown RBP7.23□□□□□ -1.25
GYPB-206ENST00000506516 BTBD3Q9Y2F9 522 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 RALGAPA1Q6GYQ0 2036 aa7.23□□□□□ -1.25
GYPB-206ENST00000506516 PTPRZ1P23471 2315 aaPredicted RBP7.23□□□□□ -1.25
GYPB-206ENST00000506516 EP300Q09472 2414 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 RIF1Q5UIP0 2472 aaKnown RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 SPAARA0A1B0GVQ0 90 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 TMEM202A6NGA9 273 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 USP27XA6NNY8 438 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 K7ESM1 405 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 PGRMC1O00264 195 aaKnown RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 TPP1O14773 563 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 GIPC1O14908 333 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 AURKAO14965 403 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 STX7O15400 261 aaKnown RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 SLC25A14O95258 325 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 TRIM16O95361 564 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 ASMTLO95671 621 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 AP2A1O95782 977 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 SLC4A1P02730 911 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 ATP1A1P05023 1023 aaKnown RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 ANXA6P08133 673 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 CDK4P11802 303 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 BMP2P12643 396 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 BPIP17213 487 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 LPOP22079 712 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 ADRA1AP35348 466 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 CHRNA4P43681 627 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 DUSP3P51452 185 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 DCDC1P59894 354 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 SIM1P81133 766 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 FOXK2Q01167 660 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 PEX6Q13608 980 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 LAMB3Q13751 1172 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 SIX1Q15475 284 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 TAF1AQ15573 450 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 ALG11Q2TAA5 492 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 TBCELQ5QJ74 424 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 TPRG1LQ5T0D9 272 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 N4BP2L1Q5TBK1 243 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 PDPK2PQ6A1A2 396 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 MRPL14Q6P1L8 145 aaKnown RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 LVRNQ6Q4G3 990 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 KDM7AQ6ZMT4 941 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 KANSL1Q7Z3B3 1105 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 GKN2Q86XP6 184 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 PELI3Q8N2H9 469 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 TRAM1L1Q8N609 369 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 DNAAF3Q8N9W5 541 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 ZNF548Q8NEK5 533 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 OR4C6Q8NH72 309 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 DTX3LQ8TDB6 740 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 MAGOHBQ96A72 148 aaKnown RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 EID2BQ96D98 161 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 MS4A14Q96JA4 679 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 CNDP2Q96KP4 475 aaKnown RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 PLEKHG4BQ96PX9 1271 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 INSM2Q96T92 566 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 APOL2Q9BQE5 337 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 ZSCAN5AQ9BUG6 496 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 LGR4Q9BXB1 951 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 SPATA16Q9BXB7 569 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 CARS2Q9HA77 564 aaKnown RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 ARNT2Q9HBZ2 717 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 CYP4F12Q9HCS2 524 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 BPIFA1Q9NP55 256 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms