RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 BRSK1Q8TDC3 778 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 NAT6Q93015 286 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 GLYATL1Q969I3 302 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 SCARF2Q96GP6 870 aaPredicted RBP16.56■□□□□ 0.24
SNCA-209ENST00000506244 VPS35Q96QK1 796 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 C19orf43Q9BQ61 176 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 ZCCHC2Q9C0B9 1178 aaKnown RBP16.56■□□□□ 0.24
SNCA-209ENST00000506244 IL17CQ9P0M4 197 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 GPR34Q9UPC5 381 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 GOLGA6L10A0A0M3HER8 536 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 GLYATL1P3A0A0U1RQE8 302 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 USP12O75317 370 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 SLC25A14O95258 325 aaPredicted RBP16.55■□□□□ 0.24
SNCA-209ENST00000506244 CELA2BP08218 269 aaPredicted RBP16.55■□□□□ 0.24
SNCA-209ENST00000506244 TCP1P17987 556 aaKnown RBP16.55■□□□□ 0.24
SNCA-209ENST00000506244 E2F1Q01094 437 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 ITGA9Q13797 1035 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 KCTD16Q68DU8 428 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 PDCD7Q8N8D1 485 aaKnown RBP16.55■□□□□ 0.24
SNCA-209ENST00000506244 PNPLA1Q8N8W4 532 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 OR6C4Q8NGE1 309 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 OSBPL9Q96SU4 736 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 TMEM168Q9H0V1 697 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 SUDS3Q9H7L9 328 aaPredicted RBP16.55■□□□□ 0.24
SNCA-209ENST00000506244 CAAP1Q9H8G2 361 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 BPIFA1Q9NP55 256 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 RAB6BQ9NRW1 208 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 SNX12Q9UMY4 172 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 NEUROG3Q9Y4Z2 214 aa16.55■□□□□ 0.24
SNCA-209ENST00000506244 HYAL3O43820 417 aaPredicted RBP16.54■□□□□ 0.24
SNCA-209ENST00000506244 HADHAP40939 763 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 POLD2P49005 469 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 CDH17Q12864 832 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 OLIG2Q13516 323 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 SEMA5AQ13591 1074 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 SPARCL1Q14515 664 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 TCEA2Q15560 299 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 MARK2Q7KZI7 788 aaKnown RBP16.54■□□□□ 0.24
SNCA-209ENST00000506244 SLC35F3Q8IY50 421 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 CHCHD4Q8N4Q1 142 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 GPBAR1Q8TDU6 330 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 SCNM1Q9BWG6 230 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 APPL1Q9UKG1 709 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 CNOT6Q9ULM6 557 aaKnown RBP16.54■□□□□ 0.24
SNCA-209ENST00000506244 PYCARDQ9ULZ3 195 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 TMEM98Q9Y2Y6 226 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 GPSM3Q9Y4H4 160 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 ARL5AQ9Y689 179 aa16.54■□□□□ 0.24
SNCA-209ENST00000506244 GOLGA4Q13439 2230 aaKnown RBP16.53■□□□□ 0.24
SNCA-209ENST00000506244 ZNF106Q9H2Y7 1883 aaKnown RBP16.53■□□□□ 0.24
SNCA-209ENST00000506244 LY6G6EA0A0G2JKS1 128 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 USP27XA6NNY8 438 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 VEGFDO43915 354 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 SUN1O94901 812 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 ADCY8P40145 1251 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 GNG11P61952 73 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 LAMB3Q13751 1172 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 GTF2H3Q13889 308 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 PYCR3Q53H96 274 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 DENND5AQ6IQ26 1287 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 DHRS13Q6UX07 377 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 FAM151BQ6UXP7 276 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 PPP1R21Q6ZMI0 780 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 NYAP1Q6ZVC0 841 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 TAB3Q8N5C8 712 aaPredicted RBP16.53■□□□□ 0.24
SNCA-209ENST00000506244 PRELID2Q8N945 189 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 DNAAF3Q8N9W5 541 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 KYQ8NBH2 561 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 FAM46DQ8NEK8 389 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 OR4K2Q8NGD2 314 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 GDAP1Q8TB36 358 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 IFI44Q8TCB0 444 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 ACTRT1Q8TDG2 376 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 DPEP2Q9H4A9 486 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 ETNK1Q9HBU6 452 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 TRIM39Q9HCM9 518 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 IL26Q9NPH9 171 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 EIF2B3Q9NR50 452 aaKnown RBP16.53■□□□□ 0.24
SNCA-209ENST00000506244 SMOXQ9NWM0 555 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 SIRPGQ9P1W8 387 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 WASF3Q9UPY6 502 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 OAS3Q9Y6K5 1087 aaKnown RBP16.53■□□□□ 0.24
SNCA-209ENST00000506244 U3KQA8 63 aa16.53■□□□□ 0.24
SNCA-209ENST00000506244 B4DGG1 531 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 AP3B1O00203 1094 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 PRAMEF1O95521 474 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 APRTP07741 180 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 ZNF140P52738 457 aaPredicted RBP16.52■□□□□ 0.24
SNCA-209ENST00000506244 SEPT6Q14141 434 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 SMAD1Q15797 465 aaKnown RBP16.52■□□□□ 0.24
SNCA-209ENST00000506244 ATP13A5Q4VNC0 1218 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 LDLRAP1Q5SW96 308 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 TMPRSS7Q7RTY8 843 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 EFL1Q7Z2Z2 1120 aaKnown RBP16.52■□□□□ 0.24
SNCA-209ENST00000506244 TMPRSS12Q86WS5 348 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 WDR48Q8TAF3 677 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 GRK7Q8WTQ7 553 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 TTC25Q96NG3 672 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 OR2AG1Q9H205 316 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 TAAR2Q9P1P5 351 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms