RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ALG6Q9Y672 507 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 UNC13CQ8NB66 2214 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 TRBV23OR9-2A0A075B6M9 112 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 NVLO15381 856 aaKnown RBP11.87□□□□□ -0.51
MED28-203ENST00000503945 ZRANB2O95218 330 aaKnown RBP eCLIP11.87□□□□□ -0.51
MED28-203ENST00000503945 SOD1P00441 154 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 KRT1P04264 644 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 MMP2P08253 660 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 SLC5A2P31639 672 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 PDX1P52945 283 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 MAZP56270 477 aaKnown RBP11.87□□□□□ -0.51
MED28-203ENST00000503945 DYNLT1P63172 113 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 TBX2Q13207 712 aaPredicted RBP11.87□□□□□ -0.51
MED28-203ENST00000503945 TEX44Q53QW1 395 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 PHF19Q5T6S3 580 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 TMEM164Q5U3C3 297 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 MFSD7Q6UXD7 560 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 CLEC14AQ86T13 490 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 NAGSQ8N159 534 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 PTCD2Q8WV60 388 aaKnown RBP11.87□□□□□ -0.51
MED28-203ENST00000503945 TFB1MQ8WVM0 346 aaKnown RBP11.87□□□□□ -0.51
MED28-203ENST00000503945 IMP4Q96G21 291 aaKnown RBP11.87□□□□□ -0.51
MED28-203ENST00000503945 COX14Q96I36 57 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 OR2M4Q96R27 311 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 SRPK1Q96SB4 655 aaKnown RBP11.87□□□□□ -0.51
MED28-203ENST00000503945 RMI1Q9H9A7 625 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 RDH14Q9HBH5 336 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 MAGEE1Q9HCI5 957 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 LUC7LQ9NQ29 371 aaKnown RBP11.87□□□□□ -0.51
MED28-203ENST00000503945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
MED28-203ENST00000503945 PLEKHM1Q9Y4G2 1056 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 HYOU1Q9Y4L1 999 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 PIEZO2Q9H5I5 2752 aa11.87□□□□□ -0.51
MED28-203ENST00000503945 AGRPO00253 132 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 PPM1DO15297 605 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 EFSO43281 561 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 CST8O60676 142 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 SLC25A14O95258 325 aaPredicted RBP11.86□□□□□ -0.51
MED28-203ENST00000503945 ATP1A1P05023 1023 aaKnown RBP11.86□□□□□ -0.51
MED28-203ENST00000503945 HGFP14210 728 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 CD1CP29017 333 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
MED28-203ENST00000503945 PPM1FP49593 454 aaPredicted RBP11.86□□□□□ -0.51
MED28-203ENST00000503945 CDK18Q07002 472 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 ZBTB17Q13105 803 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 CLN3Q13286 438 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 NPNTQ6UXI9 565 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 CCDC81Q6ZN84 652 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 CHST15Q7LFX5 561 aaPredicted RBP11.86□□□□□ -0.51
MED28-203ENST00000503945 TMC3Q7Z5M5 1100 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 TRIM74Q86UV6 250 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 CCDC170Q8IYT3 715 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 P3H4Q92791 437 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 MED8Q96G25 268 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 AHCYL2Q96HN2 611 aaKnown RBP11.86□□□□□ -0.51
MED28-203ENST00000503945 SLC38A3Q99624 504 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 CEP41Q9BYV8 373 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 GPR63Q9BZJ6 419 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 VPS18Q9P253 973 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 PISDQ9UG56 409 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 CNOT6Q9ULM6 557 aaKnown RBP11.86□□□□□ -0.51
MED28-203ENST00000503945 LOXL2Q9Y4K0 774 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 PCDHB11Q9Y5F2 797 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 PCDHA13Q9Y5I0 950 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 ST14Q9Y5Y6 855 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 MYO18BQ8IUG5 2567 aa11.86□□□□□ -0.51
MED28-203ENST00000503945 A0A0A6YYK5 440 aaPredicted RBP11.85□□□□□ -0.51
MED28-203ENST00000503945 MTSS1O43312 755 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 CDKN2BP42772 138 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 HADHBP55084 474 aaKnown RBP11.85□□□□□ -0.51
MED28-203ENST00000503945 SQSTM1Q13501 440 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 GALNT3Q14435 633 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 PCSK7Q16549 785 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 HENMT1Q5T8I9 393 aaKnown RBP11.85□□□□□ -0.51
MED28-203ENST00000503945 KAZNQ674X7 775 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 IYDQ6PHW0 289 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 SARM1Q6SZW1 724 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 LYSMD3Q7Z3D4 306 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 ZNF438Q7Z4V0 828 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 SH3KBP1Q96B97 665 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 TEKT5Q96M29 485 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 OLFM3Q96PB7 478 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 WDR24Q96S15 920 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 CCNL2Q96S94 520 aaPredicted RBP11.85□□□□□ -0.51
MED28-203ENST00000503945 DPYSL5Q9BPU6 564 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 ZSCAN5AQ9BUG6 496 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 SPATA16Q9BXB7 569 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 GLOD4Q9HC38 313 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 TRIM39Q9HCM9 518 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 KCNK4Q9NYG8 393 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 SAE1Q9UBE0 346 aaPredicted RBP11.85□□□□□ -0.51
MED28-203ENST00000503945 SHOC2Q9UQ13 582 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 PRKAB1Q9Y478 270 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 SCN8AQ9UQD0 1980 aa11.85□□□□□ -0.51
MED28-203ENST00000503945 GRID2O43424 1007 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 PSTPIP1O43586 416 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 NUAK1O60285 661 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms