RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CASQ1P31415 396 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 ACTN2P35609 894 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 ADCY8P40145 1251 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 EIF3EP60228 445 aaKnown RBP15.23■□□□□ 0.03
NUP50-219ENST00000497960 WASHC5Q12768 1159 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 XRCC4Q13426 336 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 LONRF2Q1L5Z9 754 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 C14orf28Q4W4Y0 310 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 SYT10Q6XYQ8 523 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 PID1Q7Z2X4 250 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 LYSMD3Q7Z3D4 306 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 TRIM74Q86UV6 250 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 GALNT13Q8IUC8 556 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 LSMEM2Q8N112 164 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 MAIP1Q8WWC4 291 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 SCARF2Q96GP6 870 aaPredicted RBP15.23■□□□□ 0.03
NUP50-219ENST00000497960 OR2M4Q96R27 311 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 GPR63Q9BZJ6 419 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 UBP1Q9NZI7 540 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 TAAR2Q9P1P5 351 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 SHOC2Q9UQ13 582 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 UNC13CQ8NB66 2214 aa15.23■□□□□ 0.03
NUP50-219ENST00000497960 PGRMC1O00264 195 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 SLC4A1P02730 911 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 MPOP05164 745 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 RPLP0P05388 317 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 PIRTP0C851 137 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 RBP3P10745 1247 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 NFKB1P19838 968 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 AK4P27144 223 aaPredicted RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 CD68P34810 354 aaPredicted RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 LSSP48449 732 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 ETF1P62495 437 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 GABREP78334 506 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 CTBSQ01459 385 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 BIRC2Q13490 618 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 HENMT1Q5T8I9 393 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 DARS2Q6PI48 645 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 SLC30A9Q6PML9 568 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 MARK2Q7KZI7 788 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 NRROSQ86YC3 692 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 Q8N9G6 341 aaPredicted RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 ZDHHC1Q8WTX9 485 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 PTCD2Q8WV60 388 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 FGF11Q92914 225 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 COX14Q96I36 57 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 DCBLD2Q96PD2 775 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 GFM1Q96RP9 751 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 POLR1BQ9H9Y6 1135 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 SPATS2LQ9NUQ6 558 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 VPS18Q9P253 973 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 LRIT1Q9P2V4 623 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 RABGEF1Q9UJ41 708 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 TRHDEQ9UKU6 1024 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 R3HDM2Q9Y2K5 976 aaKnown RBP15.22■□□□□ 0.03
NUP50-219ENST00000497960 ZNF711Q9Y462 761 aa15.22■□□□□ 0.03
NUP50-219ENST00000497960 DMXL2Q8TDJ6 3036 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 NTN3O00634 580 aaPredicted RBP15.21■□□□□ 0.03
NUP50-219ENST00000497960 CES2O00748 559 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 NUDT21O43809 227 aaKnown RBP15.21■□□□□ 0.03
NUP50-219ENST00000497960 PNLIPP16233 465 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ACTR1BP42025 376 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 WNT3AP56704 352 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ACTR1AP61163 376 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 CCL7P80098 99 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 LRP8Q14114 963 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 HLTFQ14527 1009 aaKnown RBP eCLIP15.21■□□□□ 0.03
NUP50-219ENST00000497960 TBC1D25Q3MII6 688 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 PYCR3Q53H96 274 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ALS2CLQ60I27 953 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 LRRC69Q6ZNQ3 347 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 TMC3Q7Z5M5 1100 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 CCNJLQ8IV13 435 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ZNF567Q8N184 647 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 RASGEF1CQ8N431 466 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 COG1Q8WTW3 980 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ATG4AQ8WYN0 398 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ATXN7L3BQ96GX2 97 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 FCRL5Q96RD9 977 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 NAP1L3Q99457 506 aaPredicted RBP15.21■□□□□ 0.03
NUP50-219ENST00000497960 SPATA16Q9BXB7 569 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 LRRN3Q9H3W5 708 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 RSPH14Q9UHP6 348 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ZNHIT2Q9UHR6 403 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 APPL1Q9UKG1 709 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ENTPD2Q9Y5L3 495 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 SAR1BQ9Y6B6 198 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 RNF215Q9Y6U7 377 aa15.21■□□□□ 0.03
NUP50-219ENST00000497960 ASPMQ8IZT6 3477 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 FREM2Q5SZK8 3169 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 A0A087WV48 116 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 RHPN2P1A8MT19 583 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 FADS2P1A8MWK0 482 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 TMX2-CTNND1H3BSU7 103 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 ZNF185O15231 689 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 RRP8O43159 456 aaKnown RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 ZW10O43264 779 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 ZNF189O75820 626 aaPredicted RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 STK10O94804 968 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms