RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 A8MX80 341 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 I6L893 689 aaPredicted RBP11.55□□□□□ -0.56
ATG3-209ENST00000496423 FANCGO15287 622 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 PYGLP06737 847 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 NELFEP18615 380 aaKnown RBP11.55□□□□□ -0.56
ATG3-209ENST00000496423 GPR1P46091 355 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 ARCN1P48444 511 aaKnown RBP11.55□□□□□ -0.56
ATG3-209ENST00000496423 CSNK1DP48730 415 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 YBEYP58557 167 aaPredicted RBP11.55□□□□□ -0.56
ATG3-209ENST00000496423 NRG1Q02297 640 aaPredicted RBP11.55□□□□□ -0.56
ATG3-209ENST00000496423 MYBPC3Q14896 1274 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 LLGL1Q15334 1064 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 ZCWPW2Q504Y3 356 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 PWWP2BQ6NUJ5 590 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 PRSS42Q7Z5A4 293 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 ZGRF1Q86YA3 2104 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 GRHL3Q8TE85 626 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 KLHL6Q8WZ60 621 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 SLC35C1Q96A29 364 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 TBC1D31Q96DN5 1066 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 FAM81BQ96LP2 452 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 COQ10AQ96MF6 247 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 NLNQ9BYT8 704 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 MCCC2Q9HCC0 563 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 NDFIP2Q9NV92 336 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 CPNE7Q9UBL6 633 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 UBA2Q9UBT2 640 aaPredicted RBP11.55□□□□□ -0.56
ATG3-209ENST00000496423 TCFL5Q9UL49 500 aa11.55□□□□□ -0.56
ATG3-209ENST00000496423 SNPHO15079 494 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
ATG3-209ENST00000496423 ASMTLO95671 621 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 F3P13726 295 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
ATG3-209ENST00000496423 TYRP1P17643 537 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 KRT9P35527 623 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 TLE4Q04727 773 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 OTUD1Q5VV17 481 aaPredicted RBP11.54□□□□□ -0.56
ATG3-209ENST00000496423 DENND2CQ68D51 928 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 FAM180AQ6UWF9 173 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 MARK2Q7KZI7 788 aaKnown RBP11.54□□□□□ -0.56
ATG3-209ENST00000496423 ENOSF1Q7L5Y1 443 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 CHST15Q7LFX5 561 aaPredicted RBP11.54□□□□□ -0.56
ATG3-209ENST00000496423 SRLQ86TD4 932 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 CUZD1Q86UP6 607 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 NLRP14Q86W24 1093 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 FAM131BQ86XD5 332 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 TMEM126BQ8IUX1 230 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 CEP97Q8IW35 865 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 TRIM48Q8IWZ4 208 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 EHBP1Q8NDI1 1231 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 TRAPPC9Q96Q05 1148 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 AKIRIN1Q9H9L7 192 aaPredicted RBP11.54□□□□□ -0.56
ATG3-209ENST00000496423 LHX3Q9UBR4 397 aa11.54□□□□□ -0.56
ATG3-209ENST00000496423 MDC1Q14676 2089 aaKnown RBP11.53□□□□□ -0.56
ATG3-209ENST00000496423 MYO7BQ6PIF6 2116 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 PSMD11O00231 422 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 PEX12O00623 359 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 SNX2O60749 519 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 JRKO75564 520 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 SCRG1O75711 98 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 VIPP01282 170 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 CYP2A6P11509 494 aaPredicted RBP11.53□□□□□ -0.56
ATG3-209ENST00000496423 TFE3P19532 575 aaPredicted RBP11.53□□□□□ -0.56
ATG3-209ENST00000496423 USP8P40818 1118 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 TSFMP43897 325 aaKnown RBP11.53□□□□□ -0.56
ATG3-209ENST00000496423 MARSP56192 900 aaKnown RBP11.53□□□□□ -0.56
ATG3-209ENST00000496423 CDC16Q13042 620 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 LAMB3Q13751 1172 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 CYTH1Q15438 398 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 TMCO4Q5TGY1 634 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 ZNF517Q6ZMY9 492 aaPredicted RBP11.53□□□□□ -0.56
ATG3-209ENST00000496423 PELI3Q8N2H9 469 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 GALNT16Q8N428 558 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 WDTC1Q8N5D0 677 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 ENDOVQ8N8Q3 282 aaKnown RBP11.53□□□□□ -0.56
ATG3-209ENST00000496423 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 OR8K5Q8NH50 307 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 SHC3Q92529 594 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 UBXN4Q92575 508 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 DTD2Q96FN9 168 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 WDR77Q9BQA1 342 aaPredicted RBP11.53□□□□□ -0.56
ATG3-209ENST00000496423 PCDHGC3Q9UN70 934 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 PCDHA7Q9UN72 937 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 TMEM98Q9Y2Y6 226 aa11.53□□□□□ -0.56
ATG3-209ENST00000496423 DCHS2Q6V1P9 2916 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 CCL21O00585 134 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 E2F3O00716 465 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 TIAF1O95411 115 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 ERBB2P04626 1255 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 GM2AP17900 193 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 SCNN1AP37088 669 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 SMSP52788 366 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 KRTAP10-9P60411 292 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 DPTQ07507 201 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 PAK1Q13153 545 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 ATP1A4Q13733 1029 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.52□□□□□ -0.573e-6■□□□□ 10.4
ATG3-209ENST00000496423 PARP15Q460N3 678 aa11.52□□□□□ -0.57
ATG3-209ENST00000496423 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms