RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MRPL11Q9Y3B7 192 aaKnown RBP9.04□□□□□ -0.96
HPS4-217ENST00000496385 WDR27A2RRH5 827 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 SOWAHBA6NEL2 793 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 APOL1O14791 398 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 TBX1O43435 398 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 B4GAT1O43505 415 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 EXTL3O43909 919 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 DFNA5O60443 496 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 SOAT2O75908 522 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 CNTN5O94779 1100 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 PRSS23O95084 383 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 POLBP06746 335 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 IL4RP24394 825 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 SLC9A3P48764 834 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 YWHAEP62258 255 aaKnown RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 STARD3Q14849 445 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 PLA2G4EQ3MJ16 856 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 FAM205BPQ63HN1 556 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 NPNTQ6UXI9 565 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 BEND5Q7L4P6 421 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 CHDHQ8NE62 594 aaPredicted RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 ZNF555Q8NEP9 628 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 NDNFQ8TB73 568 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 SPPL2BQ8TCT7 592 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 APOL4Q9BPW4 351 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 KIFC1Q9BW19 673 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 ACAT2Q9BWD1 397 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 MEAF6Q9HAF1 191 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 TRIM39Q9HCM9 518 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 ZNF304Q9HCX3 659 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 PAQR5Q9NXK6 330 aaPredicted RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 FBXO40Q9UH90 709 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 ENPP3O14638 875 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 ARHGEF9O43307 516 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 XYLBO75191 536 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 MED26O95402 600 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 LTFP02788 710 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 ERP29P30040 261 aaKnown RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 HTR2BP41595 481 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 CDH6P55285 790 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 BCAR1P56945 870 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 GPLD1P80108 840 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 GHRHRQ02643 423 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 ZBTB41Q5SVQ8 909 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 PIWIL4Q7Z3Z4 852 aaKnown RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 GALNT7Q86SF2 657 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 PLD3Q8IV08 490 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 CADM2Q8N3J6 435 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 HMGCLL1Q8TB92 370 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 SYTL5Q8TDW5 730 aaPredicted RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 STYXQ8WUJ0 223 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 FAR1Q8WVX9 515 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 OMA1Q96E52 524 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 CERS2Q96G23 380 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 METTL2AQ96IZ6 378 aaKnown RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 RNF170Q96K19 258 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 ZFYVE19Q96K21 471 aa9.03□□□□□ -0.96
HPS4-217ENST00000496385 TARS2Q9BW92 718 aaKnown RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 NXF2Q9GZY0 626 aaKnown RBP9.03□□□□□ -0.96
HPS4-217ENST00000496385 TCRBV5S2A0A599 114 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 LOC110117498-PIK3R3F6TDL0 507 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 H0YCG3 227 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 UBXN8O00124 270 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 ANGPT2O15123 496 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 PRKD3O94806 890 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 SLITRK5O94991 958 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 INMTO95050 263 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 ALPLP05186 524 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 C2P06681 752 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 SPNP16150 400 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 ITGA2P17301 1181 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 CYP2A7P20853 494 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 CFL1P23528 166 aaKnown RBP9.02□□□□□ -0.96
HPS4-217ENST00000496385 GRK4P32298 578 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 ETV6P41212 452 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 ST13P50502 369 aaKnown RBP9.02□□□□□ -0.96
HPS4-217ENST00000496385 MLLT6P55198 1093 aaPredicted RBP9.02□□□□□ -0.96
HPS4-217ENST00000496385 CYP51A1Q16850 503 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 TDRD10Q5VZ19 366 aaKnown RBP9.02□□□□□ -0.96
HPS4-217ENST00000496385 KIAA0319LQ8IZA0 1049 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 IL31RAQ8NI17 732 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 SOCS4Q8WXH5 440 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 LGALS12Q96DT0 336 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 FAM84AQ96KN4 292 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 CYP2S1Q96SQ9 504 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 CCDC32Q9BV29 185 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 MRPL9Q9BYD2 267 aaKnown RBP9.02□□□□□ -0.96
HPS4-217ENST00000496385 FAM49AQ9H0Q0 323 aaPredicted RBP9.02□□□□□ -0.96
HPS4-217ENST00000496385 APOBEC3GQ9HC16 384 aaKnown RBP9.02□□□□□ -0.96
HPS4-217ENST00000496385 HMGXB4Q9UGU5 601 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 PSAT1Q9Y617 370 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 PLXNA1Q9UIW2 1896 aa9.02□□□□□ -0.96
HPS4-217ENST00000496385 LCTP09848 1927 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 DNAJC25-GNG10A0A024R161 153 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 TYW5A2RUC4 315 aaKnown RBP9.02□□□□□ -0.97
HPS4-217ENST00000496385 C12orf71A8MTZ7 269 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 TRIM77I1YAP6 450 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms