RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 FGF11Q92914 225 aa13.92□□□□□ -0.18
MRPL55-232ENST00000495434 ZNF578Q96N58 590 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-232ENST00000495434 GFM1Q96RP9 751 aaKnown RBP13.92□□□□□ -0.18
MRPL55-232ENST00000495434 GPR63Q9BZJ6 419 aa13.92□□□□□ -0.18
MRPL55-232ENST00000495434 LRRN3Q9H3W5 708 aa13.92□□□□□ -0.18
MRPL55-232ENST00000495434 UBP1Q9NZI7 540 aa13.92□□□□□ -0.18
MRPL55-232ENST00000495434 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.92□□□□□ -0.18
MRPL55-232ENST00000495434 LRIT1Q9P2V4 623 aa13.92□□□□□ -0.18
MRPL55-232ENST00000495434 PCDHGA8Q9Y5G5 932 aa13.92□□□□□ -0.18
MRPL55-232ENST00000495434 ST14Q9Y5Y6 855 aa13.92□□□□□ -0.18
MRPL55-232ENST00000495434 A0A1W2PQM1 296 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 INPP4BO15327 924 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 ANXA9O76027 345 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 PIRTP0C851 137 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 PYGMP11217 842 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 HLA-DPA1P20036 260 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 AK4P27144 223 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 RBL1P28749 1068 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 HMGCLP35914 325 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 EIF2S3P41091 472 aaKnown RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 MLLT3P42568 568 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 GPR3P46089 330 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 ERVPABLB-1P60509 514 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 GABREP78334 506 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 CCL7P80098 99 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 OTUD4Q01804 1114 aaKnown RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 NR1D2Q14995 579 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 SLC1A5Q15758 541 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 CLPPQ16740 277 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 FAM182AQ5T1J6 154 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 ZDHHC20Q5W0Z9 365 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 ITPRIPL1Q6GPH6 555 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 SLC30A9Q6PML9 568 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 ZNF438Q7Z4V0 828 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 TRIM74Q86UV6 250 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 CCNJLQ8IV13 435 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 CDKL3Q8IVW4 592 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 LIN37Q96GY3 246 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 OXNAD1Q96HP4 312 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 MRGPRX2Q96LB1 330 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 PLEKHG4BQ96PX9 1271 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 SPATA16Q9BXB7 569 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 GBA3Q9H227 469 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 CARD9Q9H257 536 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 SUDS3Q9H7L9 328 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-232ENST00000495434 HACD3Q9P035 362 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 SHOC2Q9UQ13 582 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 RNF215Q9Y6U7 377 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 ADAMTS20P59510 1910 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 ZFHX4Q86UP3 3567 aa13.91□□□□□ -0.18
MRPL55-232ENST00000495434 MACROD2A1Z1Q3 448 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 D6RAR5 112 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 RRP8O43159 456 aaKnown RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 TLX3O43711 291 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 STK10O94804 968 aaKnown RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ASMTLO95671 621 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ATP1A1P05023 1023 aaKnown RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 MPOP05164 745 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 RPLP0P05388 317 aaKnown RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 RBP3P10745 1247 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 BPIP17213 487 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 CCKBRP32239 447 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ACTR1BP42025 376 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 PDX1P52945 283 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 GEMP55040 296 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 EIF3EP60228 445 aaKnown RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ACTR1AP61163 376 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 EIF3IQ13347 325 aaKnown RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 SIRPB2Q5JXA9 342 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ZNF569Q5MCW4 686 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 SPRED1Q7Z699 444 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 NAGSQ8N159 534 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ARL14Q8N4G2 192 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 TTC13Q8NBP0 860 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 WDR36Q8NI36 951 aaKnown RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ATXN7L3BQ96GX2 97 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 TMEM74Q96NL1 305 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 PPP1R2P1Q96PQ5 205 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 HERPUD2Q9BSE4 406 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 TSGA10Q9BZW7 698 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 TRIM39Q9HCM9 518 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 RSPH14Q9UHP6 348 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ZNHIT2Q9UHR6 403 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 OAS3Q9Y6K5 1087 aaKnown RBP13.9□□□□□ -0.18
MRPL55-232ENST00000495434 SCN8AQ9UQD0 1980 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 ITPR1Q14643 2758 aa13.9□□□□□ -0.18
MRPL55-232ENST00000495434 FAM208BQ5VWN6 2430 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 CCDC187A0A096LP49 1063 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 GOLGA6L9A6NEM1 432 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 RHPN2P1A8MT19 583 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 NUAK1O60285 661 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 PPFIA2O75334 1257 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 SLC25A14O95258 325 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-232ENST00000495434 ECEL1O95672 775 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 CLCNKAP51800 687 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 B4GALNT1Q00973 533 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 KIF26BQ2KJY2 2108 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 ANKRD20A2Q5SQ80 823 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 ANKRD20A1Q5TYW2 823 aa13.89□□□□□ -0.19
MRPL55-232ENST00000495434 ANKRD20A3Q5VUR7 823 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms