RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 B4DGG1 531 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 NRDCO43847 1150 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 TCEA3O75764 348 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 BPIP17213 487 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 PSMB4P28070 264 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 CTBSQ01459 385 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 LRP8Q14114 963 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 HLTFQ14527 1009 aaKnown RBP eCLIP22.45■■□□□ 1.18
SNIP1-203ENST00000493916 C14orf28Q4W4Y0 310 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 ZNF569Q5MCW4 686 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 CERCAMQ5T4B2 595 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 ALS2CLQ60I27 953 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 PROSER1Q86XN7 944 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 GALNT13Q8IUC8 556 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 TTC30BQ8N4P2 665 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 SLC25A41Q8N5S1 370 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 MDM1Q8TC05 714 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 CCDC74AQ96AQ1 378 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 SPATA16Q9BXB7 569 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 DPEP2Q9H4A9 486 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 RMI1Q9H9A7 625 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 TAAR2Q9P1P5 351 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 R3HDM2Q9Y2K5 976 aaKnown RBP22.45■■□□□ 1.18
SNIP1-203ENST00000493916 ST14Q9Y5Y6 855 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 C5orf60A6NFR6 353 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 DNAJC6O75061 913 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 GLB1P16278 677 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 AK4P27144 223 aaPredicted RBP22.44■■□□□ 1.18
SNIP1-203ENST00000493916 PRPSAP1Q14558 356 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 RTP5Q14D33 572 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 SEL1L2Q5TEA6 688 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 MEI1Q5TIA1 1274 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 ZDHHC20Q5W0Z9 365 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 C17orf82Q86X59 251 aaPredicted RBP22.44■■□□□ 1.18
SNIP1-203ENST00000493916 KLHDC8BQ8IXV7 354 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 SLC35B2Q8TB61 432 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 CCDC110Q8TBZ0 833 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 ALS2CR12Q96Q35 445 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 GRPEL1Q9HAV7 217 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 SPATS2LQ9NUQ6 558 aaKnown RBP22.44■■□□□ 1.18
SNIP1-203ENST00000493916 GPSM3Q9Y4H4 160 aa22.44■■□□□ 1.18
SNIP1-203ENST00000493916 TCRBV7S2A1N4TA0A589 114 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 ASMTLO95671 621 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 ATP1A1P05023 1023 aaKnown RBP22.43■■□□□ 1.18
SNIP1-203ENST00000493916 PNLIPP16233 465 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 ADRA1AP35348 466 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 SLC30A9Q6PML9 568 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 RANBP10Q6VN20 620 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 RBM44Q6ZP01 1051 aaKnown RBP22.43■■□□□ 1.18
SNIP1-203ENST00000493916 MARK2Q7KZI7 788 aaKnown RBP22.43■■□□□ 1.18
SNIP1-203ENST00000493916 DTX3LQ8TDB6 740 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 ZDHHC1Q8WTX9 485 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 GRAMD1AQ96CP6 724 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 FICDQ9BVA6 458 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 LZTFL1Q9NQ48 299 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 RABGEF1Q9UJ41 708 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 APPL1Q9UKG1 709 aa22.43■■□□□ 1.18
SNIP1-203ENST00000493916 MYLKQ15746 1914 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 GPR89AB7ZAQ6 455 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 TAF4O00268 1085 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 NTN3O00634 580 aaPredicted RBP22.42■■□□□ 1.18
SNIP1-203ENST00000493916 NUDT21O43809 227 aaKnown RBP22.42■■□□□ 1.18
SNIP1-203ENST00000493916 CSO75390 466 aaKnown RBP22.42■■□□□ 1.18
SNIP1-203ENST00000493916 AGTP01019 485 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 GPR89BP0CG08 455 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 CYP4F3Q08477 520 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 GLT6D1Q7Z4J2 308 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 PHYKPLQ8IUZ5 450 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 SFTPA2Q8IWL1 248 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 FAM71DQ8N9W8 422 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 BLOC1S5Q8TDH9 187 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 GLYATL1Q969I3 302 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 VPS35Q96QK1 796 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 FRMD8P1Q9BZ68 369 aaPredicted RBP22.42■■□□□ 1.18
SNIP1-203ENST00000493916 CARD9Q9H257 536 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 IL17CQ9P0M4 197 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 PCDHB1Q9Y5F3 818 aa22.42■■□□□ 1.18
SNIP1-203ENST00000493916 SRRM3A6NNA2 597 aaPredicted RBP22.41■■□□□ 1.18
SNIP1-203ENST00000493916 NUAK1O60285 661 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 PPFIA2O75334 1257 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 SLC25A14O95258 325 aaPredicted RBP22.41■■□□□ 1.18
SNIP1-203ENST00000493916 ACTR1BP42025 376 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 ACTR1AP61163 376 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 RPS6KA1Q15418 735 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 ISXQ2M1V0 245 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 TRIM39Q9HCM9 518 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 BPIFA1Q9NP55 256 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.41■■□□□ 1.18
SNIP1-203ENST00000493916 ATXN10Q9UBB4 475 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 ZNHIT2Q9UHR6 403 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 PLEKHM1Q9Y4G2 1056 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 PCYT1BQ9Y5K3 369 aaPredicted RBP22.41■■□□□ 1.18
SNIP1-203ENST00000493916 RNF215Q9Y6U7 377 aa22.41■■□□□ 1.18
SNIP1-203ENST00000493916 SPIDRQ14159 915 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 PARP6Q2NL67 630 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 ARHGEF18Q6ZSZ5 1173 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 ZNF438Q7Z4V0 828 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 SLC13A5Q86YT5 568 aaPredicted RBP22.4■■□□□ 1.18
SNIP1-203ENST00000493916 CCNJLQ8IV13 435 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 RTP4Q96DX8 246 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms