RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 FAM83AQ86UY5 434 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 RANBP3LQ86VV4 465 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 DENND1CQ8IV53 801 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 TMEM86AQ8N2M4 240 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ATP6V1C2Q8NEY4 427 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 MTMR10Q9NXD2 777 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ADGRL3Q9HAR2 1447 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 UMODL1Q5DID0 1318 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 TRIM64BA6NI03 449 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ENTPD5O75356 428 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 CSDE1O75534 798 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ATP5C1P36542 298 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ABCG1P45844 678 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ACVR2BQ13705 512 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 PUS10Q3MIT2 529 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF782Q6ZMW2 699 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 KCTD8Q6ZWB6 473 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 UBE2R2Q712K3 238 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 SCUBE3Q8IX30 993 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 GALNT6Q8NCL4 622 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 THAP6Q8TBB0 222 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 SLC2A14Q8TDB8 520 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 HELQQ8TDG4 1101 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 HDAC7Q8WUI4 952 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 CLP1Q92989 425 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 OSMRQ99650 979 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 TCF25Q9BQ70 676 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ATG10Q9H0Y0 220 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 SEMA6BQ9H3T3 888 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 MCCC2Q9HCC0 563 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 MARCH2Q9P0N8 246 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 TRPV2Q9Y5S1 764 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ARHGEF40Q8TER5 1519 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 WASHC1A8K0Z3 465 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 WASH3PC4AMC7 463 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 PPM1BO75688 479 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 C22orf31O95567 290 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 RPLP0P05388 317 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 PSKH1P11801 424 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 S100A10P60903 97 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 PHC1P78364 1004 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 CPSF6Q16630 551 aaKnown RBP eCLIP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 CAPN13Q6MZZ7 669 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 TTI2Q6NXR4 508 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 SLC27A1Q6PCB7 646 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 WASH2PQ6VEQ5 465 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 FBXO16Q8IX29 292 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 TATDN2Q93075 761 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 LINGO1Q96FE5 620 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ABCG4Q9H172 646 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 UCKL1Q9NWZ5 548 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF69Q9UC07 566 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ASF1AQ9Y294 204 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 HMGXB3Q12766 1538 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 CPSF4LA6NMK7 179 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 SRRM3A6NNA2 597 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 GRIN3BO60391 1043 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 NRP2O60462 931 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 IFNW1P05000 195 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ABHD2P08910 425 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 IFI30P13284 250 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 RPS2P15880 293 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 KDELR1P24390 212 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 MAN2A2P49641 1150 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 DRG2P55039 364 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ILF3Q12906 894 aaKnown RBP eCLIP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 FAM153CQ494X1 144 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF311Q5JNZ3 666 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 CCNYL2Q5T2Q4 361 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 RNASEH2BQ5TBB1 312 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 IQSEC1Q6DN90 963 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 C17orf64Q86WR6 236 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 CIR1Q86X95 450 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 C4orf19Q8IY42 314 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 PQLC1Q8N2U9 271 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 PNLDC1Q8NA58 520 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 SLC22A4Q9H015 551 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 REXO2Q9Y3B8 237 aaKnown RBP7.83□□□□□ -1.16
BRCA1-221ENST00000493795 U3KQV3 271 aa7.83□□□□□ -1.16
BRCA1-221ENST00000493795 TMEM94Q12767 1356 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 BHMG1C9JSJ3 638 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 FPGTO14772 594 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PER2O15055 1255 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 GSC2O15499 205 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SNAPC5O75971 98 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ANGPTL1O95841 491 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PEPDP12955 493 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ACSL1P33121 698 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ASMTP46597 345 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 RORCP51449 518 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 OR2B6P58173 313 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 GCNT1Q02742 428 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 TMEM44Q2T9K0 475 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 GFOD2Q3B7J2 385 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 KLHL26Q53HC5 615 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 COLEC12Q5KU26 742 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 USP30Q70CQ3 517 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SV2AQ7L0J3 742 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms