RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ZSCAN1Q8NBB4 408 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 HAUS1Q96CS2 278 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 HERPUD2Q9BSE4 406 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 CARD9Q9H257 536 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 TRABDQ9H4I3 376 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 GLOD4Q9HC38 313 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 HACD3Q9P035 362 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 FAM153AQ9UHL3 310 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 RABGEF1Q9UJ41 708 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 TRHDEQ9UKU6 1024 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 ANKRD11Q6UB99 2663 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 C3orf70A6NLC5 250 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 CDRT15L2A8MXV6 281 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 HGSO14964 777 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 NVLO15381 856 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 NDST3O95803 873 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 CD82P27701 267 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 CSTF2P33240 577 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 MAZP56270 477 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 GSDMDP57764 484 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 COPS2P61201 443 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 VAC14Q08AM6 782 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 GALNT3Q14435 633 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 SPOCD1Q6ZMY3 1216 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 PID1Q7Z2X4 250 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 LYSMD3Q7Z3D4 306 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 KATNAL2Q8IYT4 538 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 TRAM1L1Q8N609 369 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 CNTD1Q8N815 330 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 LRRN4Q8WUT4 740 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 COX14Q96I36 57 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 TEKT5Q96M29 485 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 OLFM3Q96PB7 478 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 PPP1R2P1Q96PQ5 205 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 BAG1Q99933 345 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 FSD1LQ9BXM9 530 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 B3GNT4Q9C0J1 378 aa16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 ATXN7L1Q9ULK2 861 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-217ENST00000491330 KIR2DS5A0A0G2JLQ3 304 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 A0A0G2JNG1 304 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 KIR2DS3K7RE56 304 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 GRID2O43424 1007 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 DUX1O43812 170 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 PMPCBO75439 489 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 EPOP01588 193 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 SLC4A1P02730 911 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 CDKN2BP42772 138 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 MAPK10P53779 464 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 OR1D5P58170 312 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 DCDC1P59894 354 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 ZFP36L1Q07352 338 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 C19orf57Q0VDD7 668 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 PRPSAP1Q14558 356 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 KIR2DS5Q14953 304 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 PTPRRQ15256 657 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 HENMT1Q5T8I9 393 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 KCTD16Q68DU8 428 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 ITPRIPL1Q6GPH6 555 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 NPNTQ6UXI9 565 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 USP53Q70EK8 1073 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 TRIM74Q86UV6 250 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 C17orf82Q86X59 251 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 NRROSQ86YC3 692 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 GDAP1Q8TB36 358 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 BRSK1Q8TDC3 778 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 CCNL2Q96S94 520 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 CEP41Q9BYV8 373 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 ZCCHC2Q9C0B9 1178 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 EPB41L1Q9H4G0 881 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 TRIM39Q9HCM9 518 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 SHOC2Q9UQ13 582 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 EFR3BQ9Y2G0 817 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 HYOU1Q9Y4L1 999 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 FRYQ5TBA9 3013 aa16.42■□□□□ 0.22
PDLIM2-217ENST00000491330 LRRK1Q38SD2 2015 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 H7C0C1 242 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ERVH48-1M5A8F1 160 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 PJA2O43164 708 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 VEGFDO43915 354 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 SNX2O60749 519 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 PPFIA2O75334 1257 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ANXA9O76027 345 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 SOD1P00441 154 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ATP1A1P05023 1023 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 MMP2P08253 660 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 SLC5A2P31639 672 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ATP5OP48047 213 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 VAV2P52735 878 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 B4GALNT1Q00973 533 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 HHEXQ03014 270 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 XRCC4Q13426 336 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 NR1D2Q14995 579 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 TAZQ16635 292 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 SOWAHCQ53LP3 525 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ARHGAP40Q5TG30 622 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ALS2CLQ60I27 953 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ZNF438Q7Z4V0 828 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 B3GNT8Q7Z7M8 397 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ZC3H18Q86VM9 953 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms