RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 NDST3O95803 873 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 NFKB1P19838 968 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 ALS2CLQ60I27 953 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 CCDC70Q6NSX1 233 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 SPACA3Q8IXA5 215 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 QKIQ96PU8 341 aaKnown RBP eCLIP31.12■■■□□ 2.57
LDB1-204ENST00000490751 HEMGNQ9BXL5 484 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 GPR63Q9BZJ6 419 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 STRADBQ9C0K7 418 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 KLHL8Q9P2G9 620 aaPredicted RBP31.12■■■□□ 2.57
LDB1-204ENST00000490751 PCYT1BQ9Y5K3 369 aaPredicted RBP31.12■■■□□ 2.57
LDB1-204ENST00000490751 DUSP10Q9Y6W6 482 aa31.12■■■□□ 2.57
LDB1-204ENST00000490751 RHPN2P1A8MT19 583 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 DNAJC6O75061 913 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 CCKBRP32239 447 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 CTNNA1P35221 906 aaKnown RBP31.11■■■□□ 2.57
LDB1-204ENST00000490751 NAP1L1P55209 391 aaKnown RBP31.11■■■□□ 2.57
LDB1-204ENST00000490751 B4GALNT1Q00973 533 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 BIRC2Q13490 618 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 LRP8Q14114 963 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 BBS12Q6ZW61 710 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 ZNF438Q7Z4V0 828 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 TMC3Q7Z5M5 1100 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 GPR26Q8NDV2 337 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 CALR3Q96L12 384 aaKnown RBP31.11■■■□□ 2.57
LDB1-204ENST00000490751 ZNHIT2Q9UHR6 403 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 SCN8AQ9UQD0 1980 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 PRKAB1Q9Y478 270 aa31.11■■■□□ 2.57
LDB1-204ENST00000490751 TNFSF15O95150 251 aa31.1■■■□□ 2.57
LDB1-204ENST00000490751 TLE3Q04726 772 aa31.1■■■□□ 2.57
LDB1-204ENST00000490751 EIF3IQ13347 325 aaKnown RBP31.1■■■□□ 2.57
LDB1-204ENST00000490751 RAB11FIP2Q7L804 512 aa31.1■■■□□ 2.57
LDB1-204ENST00000490751 ACRBPQ8NEB7 543 aa31.1■■■□□ 2.57
LDB1-204ENST00000490751 HTR3CQ8WXA8 447 aa31.1■■■□□ 2.57
LDB1-204ENST00000490751 SPATA16Q9BXB7 569 aa31.1■■■□□ 2.57
LDB1-204ENST00000490751 FAM153AQ9UHL3 310 aa31.1■■■□□ 2.57
LDB1-204ENST00000490751 CACNA1GO43497 2377 aa31.1■■■□□ 2.57
LDB1-204ENST00000490751 CDRT15L2A8MXV6 281 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 PLD2O14939 933 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 B4GAT1O43505 415 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 MLLT3P42568 568 aaPredicted RBP31.09■■■□□ 2.57
LDB1-204ENST00000490751 OR1D5P58170 312 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 DCDC1P59894 354 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 NR1D2Q14995 579 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 ZNF567Q8N184 647 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 FBXO39Q8N4B4 442 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 KCNE4Q8WWG9 221 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 VAT1Q99536 393 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 LACRTQ9GZZ8 138 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 RAD18Q9NS91 495 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 NFKBIL1Q9UBC1 381 aaPredicted RBP31.09■■■□□ 2.57
LDB1-204ENST00000490751 PCDHA3Q9Y5H8 950 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 SPO11Q9Y5K1 396 aa31.09■■■□□ 2.57
LDB1-204ENST00000490751 BTNL10A8MVZ5 291 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 HACD1B0YJ81 288 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 F5H423 210 aaPredicted RBP31.08■■■□□ 2.57
LDB1-204ENST00000490751 ALDH4A1P30038 563 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 WNT3AP56704 352 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 COPS2P61201 443 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 AMZ1Q400G9 498 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 MAP9Q49MG5 647 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 ZNF569Q5MCW4 686 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 CCDC181Q5TID7 509 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 KDELC1Q6UW63 502 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 CHST15Q7LFX5 561 aaPredicted RBP31.08■■■□□ 2.57
LDB1-204ENST00000490751 PID1Q7Z2X4 250 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 TMPRSS9Q7Z410 1059 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 SRPK1Q96SB4 655 aaKnown RBP31.08■■■□□ 2.57
LDB1-204ENST00000490751 HERPUD2Q9BSE4 406 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 ZSCAN5AQ9BUG6 496 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 RMI1Q9H9A7 625 aa31.08■■■□□ 2.57
LDB1-204ENST00000490751 APOC4-APOC2K7ER74 178 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 APOC2P02655 101 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 ITGA2BP08514 1039 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 VAV2P52735 878 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 ZFP36L1Q07352 338 aaKnown RBP31.07■■■□□ 2.56
LDB1-204ENST00000490751 CLEC14AQ86T13 490 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 TRAM1L1Q8N609 369 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 FCRL5Q96RD9 977 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 BAG1Q99933 345 aaPredicted RBP31.07■■■□□ 2.56
LDB1-204ENST00000490751 PRORYQ9H606 182 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 RDH14Q9HBH5 336 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 ARFGAP3Q9NP61 516 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 PTPRQQ9UMZ3 2332 aa31.07■■■□□ 2.56
LDB1-204ENST00000490751 LOC285095A0A1B0GVY8 99 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 H7C0C1 242 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 AURKAO14965 403 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 PPM1DO15297 605 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 CPNE6O95741 557 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 HGFP14210 728 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 HOXB3P14651 431 aaPredicted RBP31.06■■■□□ 2.56
LDB1-204ENST00000490751 UGT1A5P35504 534 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 ATP5OP48047 213 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 XRCC4Q13426 336 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 NOMO1Q15155 1222 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 SLITRK4Q8IW52 837 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 OXNAD1Q96HP4 312 aaPredicted RBP31.06■■■□□ 2.56
LDB1-204ENST00000490751 CARD9Q9H257 536 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 ATXN10Q9UBB4 475 aa31.06■■■□□ 2.56
LDB1-204ENST00000490751 CCDC66A2RUB6 948 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms