RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	WDR1	O75083	606 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	POLR2C	P19387	275 aa	Predicted RBP	4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	CCR9	P51686	369 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	EEF1A1	P68104	462 aa	Known RBP	4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	PITX1	P78337	314 aa	Predicted RBP	4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	ZNF234	Q14588	700 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	CDON	Q4KMG0	1287 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	PDSS1	Q5T2R2	415 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	EEF1A1P5	Q5VTE0	462 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	C18orf63	Q68DL7	685 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	OR7E24	Q6IFN5	339 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	C19orf48	Q6RUI8	117 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	ZNF852	Q6ZMS4	543 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	SLC24A4	Q8NFF2	622 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	IL17RE	Q8NFR9	667 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	ALG14	Q96F25	216 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	STRA6	Q9BX79	667 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	SLC26A6	Q9BXS9	759 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	ACSL5	Q9ULC5	683 aa		4.06	□□□□□ -1.76
PHC3-212	ENST00000490723	ZNHIT1	O43257	154 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	RTN3	O95197	1032 aa	Predicted RBP	4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	KCNK5	O95279	499 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	MLYCD	O95822	493 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	HOXC9	P31274	260 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	APOBEC1	P41238	236 aa	Known RBP	4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	FASLG	P48023	281 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	CLDN20	P56880	219 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	KRTAP10-7	P60409	375 aa	Predicted RBP	4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	COG7	P83436	770 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	CDC16	Q13042	620 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	MAD2L1	Q13257	205 aa	Predicted RBP	4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	TBCE	Q15813	527 aa	Predicted RBP	4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	DECR1	Q16698	335 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	TST	Q16762	297 aa	Known RBP	4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	ALF	Q53S48	1182 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	SIRPB2	Q5JXA9	342 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	INTS11	Q5TA45	600 aa	Known RBP	4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	FAM171B	Q6P995	826 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	ZNF449	Q6P9G9	518 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	GSG1L	Q6UXU4	331 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	CPLX4	Q7Z7G2	160 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	NFE4	Q86UQ8	179 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	NRROS	Q86YC3	692 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	MAP7D3	Q8IWC1	876 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	TMEM116	Q8NCL8	245 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	ETNPPL	Q8TBG4	499 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	SLC44A1	Q8WWI5	657 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	TAAR8	Q969N4	342 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	FAM149B1	Q96BN6	582 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	PERP	Q96FX8	193 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	PGLYRP2	Q96PD5	576 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	LRRC1	Q9BTT6	524 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	FKRP	Q9H9S5	495 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	POLR1B	Q9H9Y6	1135 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	RANGRF	Q9HD47	186 aa	Predicted RBP	4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	IRAK4	Q9NWZ3	460 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	OR14J1	Q9UGF5	321 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	DLGAP4	Q9Y2H0	992 aa		4.05	□□□□□ -1.76
PHC3-212	ENST00000490723	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	FAM237B	A0A1B0GVD1	139 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723		A0A1W2PRG0	241 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	PLEKHD1	A6NEE1	506 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	PRSS47	A8MTI9	375 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	ERVV-2	B6SEH9	535 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	JRK	O75564	520 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	UBA1	P22314	1058 aa	Known RBP	4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	ELF1	P32519	619 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	KRT9	P35527	623 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	TERF1	P54274	439 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	LINC01547	P58512	204 aa	Predicted RBP	4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	GOLGA8DP	Q0D2H9	430 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	CSTF3	Q12996	717 aa	Known RBP	4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	KRTAP27-1	Q3LI81	207 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	PMS2CL	Q68D20	193 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	CYP20A1	Q6UW02	462 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	PCYOX1L	Q8NBM8	494 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	NAXE	Q8NCW5	288 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	ARHGEF26	Q96DR7	871 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	LINGO1	Q96FE5	620 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	WDFY2	Q96P53	400 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	SMC6	Q96SB8	1091 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	MAP7D2	Q96T17	732 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	NEURL2	Q9BR09	285 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	LTB4R2	Q9NPC1	389 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	COPG2	Q9UBF2	871 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	LIMA1	Q9UHB6	759 aa	Known RBP	4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	PGAP2	Q9UHJ9	254 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	KCNE2	Q9Y6J6	123 aa		4.04	□□□□□ -1.76
PHC3-212	ENST00000490723	CCDC189	A1A4V9	331 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723		H3BQ06	376 aa	Predicted RBP	4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	ANKRD28	O15084	1053 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	KCNN4	O15554	427 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	SLC25A12	O75746	678 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	IPO7	O95373	1038 aa	Known RBP	4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	FAM106CP	P0CH98	169 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	ANOS1	P23352	680 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	UBA7	P41226	1012 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	RPS3A	P61247	264 aa	Known RBP	4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	PLIN5	Q00G26	463 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms