RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 RGMBQ6NW40 437 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 DUS1LQ6P1R4 473 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CRELD2Q6UXH1 353 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 DLK2Q6UY11 383 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 GLDNQ6ZMI3 551 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CCNI2Q6ZMN8 369 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 FOXRED2Q8IWF2 684 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 TTC39CQ8N584 583 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CCDC89Q8N998 374 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 C9orf106Q8NAJ2 232 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CSNK2A3Q8NEV1 391 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 SNRNP27Q8WVK2 155 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 ORAI1Q96D31 301 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 SCMH1Q96GD3 660 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 RSRC1Q96IZ7 334 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 SMARCAD1Q9H4L7 1026 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 GRPEL1Q9HAV7 217 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 MMP25Q9NPA2 562 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 ACSS1Q9NUB1 689 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 SELENONQ9NZV5 590 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CWC15Q9P013 229 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 MALT1Q9UDY8 824 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 SESN1Q9Y6P5 492 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 POLR1AO95602 1720 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 ARHGAP31Q2M1Z3 1444 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CLEC18AA5D8T8 446 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 BTBD18B2RXH4 712 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 VILLO15195 856 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 HCRTR2O43614 444 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 KDM4BO94953 1096 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 CLDN14O95500 239 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 ZBTB11O95625 1053 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 CLTBP09497 229 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 SRCP12931 536 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 PLA2G2AP14555 144 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 DAOP14920 347 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 TMEM11P17152 192 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 HOXC9P31274 260 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 CCKARP32238 428 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 CLCNKAP51800 687 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 ART1P52961 327 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 HNRNPH2P55795 449 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 KRTAP10-11P60412 298 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 SEC61BP60468 96 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 ZBED6P86452 979 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 ECT2LQ008S8 904 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 TFAP4Q01664 338 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 MC1RQ01726 317 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 CREB5Q02930 508 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 GRSF1Q12849 480 aaKnown RBP eCLIP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 LRMPQ12912 555 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 ACVR2BQ13705 512 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 NFATC4Q14934 902 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 SF3B4Q15427 424 aaKnown RBP eCLIP3.85□□□□□ -1.791e-9■■■■■ 43.2
ECHDC1-217ENST00000488087 ADIPOQQ15848 244 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 IZUMO4Q1ZYL8 232 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 SASS6Q6UVJ0 657 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 SEPT14Q6ZU15 432 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 CENPQQ7L2Z9 268 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 ADGRF2Q8IZF7 708 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 CLEC18CQ8NCF0 446 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 WFIKKN2Q8TEU8 576 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 FAM120BQ96EK7 910 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 PGAM5Q96HS1 289 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 ADGRG7Q96K78 797 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 PPP1R13BQ96KQ4 1090 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 MEIS3Q99687 375 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 MAK16Q9BXY0 300 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 IL25Q9H293 177 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 PDZD7Q9H5P4 517 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 C6orf106Q9H6K1 298 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 TBC1D29Q9UFV1 150 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 TMEM5Q9Y2B1 443 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 LOXL2Q9Y4K0 774 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 TTLL3Q9Y4R7 772 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 RAD50Q92878 1312 aa3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 ROCK2O75116 1388 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 LRPPRCP42704 1394 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 TOP2AP11388 1531 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-217ENST00000488087 VIRMAQ69YN4 1812 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 FRMD3A2A2Y4 597 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 TULP2O00295 520 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 ATP2A1O14983 1001 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 SPINT2O43291 252 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 KCNAB3O43448 404 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 GPC4O75487 556 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 RFPL2O75678 378 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 AFPP02771 609 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 TGFB3P10600 412 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 UBA1P22314 1058 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 MCCP23508 829 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 MCM3P25205 808 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 HADHAP40939 763 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 CDH8P55286 799 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 KRTAP10-9P60411 292 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 GABPB1Q06547 395 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 ACSM2AQ08AH3 577 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 EPS8Q12929 822 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 DLG1Q12959 904 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 GRIK2Q13002 908 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms