RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 KCTD14Q9BQ13 255 aaPredicted RBP12.34□□□□□ -0.43
TMEM39B-208ENST00000487305 MAGEE1Q9HCI5 957 aa12.34□□□□□ -0.43
TMEM39B-208ENST00000487305 PREBQ9HCU5 417 aa12.34□□□□□ -0.43
TMEM39B-208ENST00000487305 SLC52A3Q9NQ40 469 aa12.34□□□□□ -0.43
TMEM39B-208ENST00000487305 GMIPQ9P107 970 aa12.34□□□□□ -0.43
TMEM39B-208ENST00000487305 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
TMEM39B-208ENST00000487305 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
TMEM39B-208ENST00000487305 ATP6AP2A0A1C7CYW4 349 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 FAM92AA1XBS5 289 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 TRIM64BA6NI03 449 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 MEIS3P2A8K0S8 358 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 TMEM189-UBE2V1I3L0A0 370 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 PRAMEF11O60813 436 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 KATNA1O75449 491 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 SLC22A3O75751 556 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 ATP6AP2O75787 350 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 HDCP19113 662 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 IGFBP6P24592 240 aaPredicted RBP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 DCKP27707 260 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 RPS9P46781 194 aaKnown RBP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 ARSDP51689 593 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 EMP3P54852 163 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 MGAT3Q09327 533 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 GRSF1Q12849 480 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 CYP51A1Q16850 503 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 PFKFB4Q16877 469 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 TBC1D25Q3MII6 688 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 XKR7Q5GH72 579 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 PRAMEF19Q5SWL8 479 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 CCNYL2Q5T2Q4 361 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 ZNF549Q6P9A3 640 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 CD300LGQ6UXG3 332 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 PDPRQ8NCN5 879 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 OR56A4Q8NGH8 313 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 FNDC8Q8TC99 324 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 SOCS4Q8WXH5 440 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 NRBF2Q96F24 287 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 TBATAQ96M53 351 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 ZCWPW1Q9H0M4 648 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 FBRSL1Q9HCM7 1045 aaKnown RBP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 MARCH4Q9P2E8 410 aaPredicted RBP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 FADS3Q9Y5Q0 445 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 PLXNA3P51805 1871 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 A0A0J9YVX5 310 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 CCDC154A6NI56 674 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 J3KR12 359 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 DLGAP1O14490 977 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 SNX2O60749 519 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 DNAJB5O75953 348 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 FGFR3P22607 806 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 EMX2Q04743 252 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 DSC3Q14574 896 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 ZNF235Q14590 738 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 CRY1Q16526 586 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 SMU1Q2TAY7 513 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 USP51Q70EK9 711 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 LPPQ93052 612 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 PSMG2Q969U7 264 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 MAGED4Q96JG8 741 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 DNAJC1Q96KC8 554 aaKnown RBP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 LRRC3Q9BY71 257 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 NMUR1Q9HB89 426 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 CRYL1Q9Y2S2 319 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 OAS3Q9Y6K5 1087 aaKnown RBP12.33□□□□□ -0.44
TMEM39B-208ENST00000487305 CCDC162PA2VCL2 907 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 SAC3D1A6NKF1 404 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 ARNTLO00327 626 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 ACOX3O15254 700 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 DEAF1O75398 565 aaPredicted RBP12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 GMNNO75496 209 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 HPRP00739 348 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 CHRNA1P02708 482 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 BRCC3P46736 316 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 GSK3BP49841 420 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 HLCSP50747 726 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 CDH13P55290 713 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 NKX3-2P78367 333 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 PRKG2Q13237 762 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 SPIDRQ14159 915 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 MYBPC3Q14896 1274 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 OR4D1Q15615 310 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 UGT3A1Q6NUS8 523 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 CLVS1Q8IUQ0 354 aaPredicted RBP12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 HID1Q8IV36 788 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 CMTR2Q8IYT2 770 aaKnown RBP12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 VPS50Q96JG6 964 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 CDK5RAP1Q96SZ6 601 aaKnown RBP12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 SEMA3CQ99985 751 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 SEZ6LQ9BYH1 1024 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 CXorf21Q9HAI6 301 aa12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 TNPO3Q9Y5L0 923 aaKnown RBP12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 TDRD15B5MCY1 1934 aaKnown RBP12.32□□□□□ -0.44
TMEM39B-208ENST00000487305 TCRBV5S2A0A599 114 aa12.31□□□□□ -0.44
TMEM39B-208ENST00000487305 SUPT3HB4E1H0 165 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms