RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 IL37Q9NZH6 218 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF219Q9P2Y4 722 aaPredicted RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 NAALAD2Q9Y3Q0 740 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 COL11A2P13942 1736 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-208ENST00000486641 ISPDA4D126 451 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 ASPDHA6ND91 283 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 FAM72CH0Y354 149 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 UBXN8O00124 270 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 EEF2KO00418 725 aaKnown RBP10.6□□□□□ -0.71
CCDC171-208ENST00000486641 KMOO15229 486 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 RAD51BO15315 384 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 TBX1O43435 398 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 SCO2O43819 266 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 PRSS23O95084 383 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 ACVR2AP27037 513 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 KCNC1P48547 511 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 STAT5BP51692 787 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 IST1P53990 364 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 SLC12A2P55011 1212 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 OR4D2P58180 307 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 SH3BP2P78314 561 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 FAM72AQ5TYM5 149 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 RSBN1Q5VWQ0 802 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-208ENST00000486641 FAM72DQ6L9T8 149 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 PKN3Q6P5Z2 889 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 TMC5Q6UXY8 1006 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 RFPL4BQ6ZWI9 263 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 BEND5Q7L4P6 421 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 FAM72BQ86X60 149 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 PHYKPLQ8IUZ5 450 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 HS3ST5Q8IZT8 346 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 CLYBLQ8N0X4 340 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 DEFB106AQ8N104 65 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF555Q8NEP9 628 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 ATL1Q8WXF7 558 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF300Q96RE9 604 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-208ENST00000486641 BCL7BQ9BQE9 202 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 FZD8Q9H461 694 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 EPS8L2Q9H6S3 715 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 MINDY3Q9H8M7 445 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 SLC2A6Q9UGQ3 507 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 EVLQ9UI08 416 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-208ENST00000486641 PNMA8BQ9ULN7 279 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-208ENST00000486641 N6AMT1Q9Y5N5 214 aa10.6□□□□□ -0.71
CCDC171-208ENST00000486641 G3V2T6 193 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 PIP5K1BO14986 540 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 XPNPEP2O43895 674 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 CCNKO75909 580 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 MATN4O95460 622 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 IQCF3P0C7M6 154 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 PRKCAP17252 672 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 MTHFRP42898 656 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 MAP2K4P45985 399 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 TRPC1P48995 793 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 FOXA1P55317 472 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 SNX16P57768 344 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ISL1P61371 349 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 RACK1P63244 317 aaKnown RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 CCNA1P78396 465 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 TOP3AQ13472 1001 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 POU6F1Q14863 301 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 RPS6KA2Q15349 733 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 UNC50Q53HI1 259 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF678Q5SXM1 525 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 AGAP9Q5VTM2 703 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 GLYATQ6IB77 296 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 SLC22A15Q8IZD6 547 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 FAM83FQ8NEG4 500 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 TEX37Q96LM6 180 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 FEM1AQ9BSK4 669 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ASPSCR1Q9BZE9 553 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 RPAP3Q9H6T3 665 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 SDR39U1Q9NRG7 319 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ANKRD12Q6UB98 2062 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 A0A1W2PP18 115 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 TNPO2O14787 897 aaKnown RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 HCRTO43612 131 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 LTA4HP09960 611 aaKnown RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 CPB1P15086 417 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ERCC2P18074 760 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 CD6P30203 668 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 GRK3P35626 688 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 CASP2P42575 452 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 TKTL1P51854 596 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 POU4F1Q01851 419 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 KCNAB2Q13303 367 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 MXD4Q14582 209 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 SLC10A6Q3KNW5 377 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF789Q5FWF6 425 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 PCID2Q5JVF3 399 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 NOL9Q5SY16 702 aaKnown RBP10.59□□□□□ -0.71
CCDC171-208ENST00000486641 OTOP3Q7RTS5 596 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 P2RY8Q86VZ1 359 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 PROSER1Q86XN7 944 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ZDHHC13Q8IUH4 622 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 PNPLA1Q8N8W4 532 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ANKRD49Q8WVL7 239 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 RORBQ92753 470 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 OR2B2Q9GZK3 357 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms