RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 OGFRQ9NZT2 677 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 TMEM63CQ9P1W3 806 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 G3BP2Q9UN86 482 aaKnown RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 SLC17A4Q9Y2C5 497 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 RASA4BC9J798 803 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 C19orf84I3L1E1 186 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 RASA4O43374 803 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 SRGAP2O75044 1071 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 DAB1O75553 588 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 IGSF6O95976 241 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 ETFBP38117 255 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 MAPK9P45984 424 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 GLRBP48167 497 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 ART1P52961 327 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 GDF10P55107 478 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 CDK3Q00526 305 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 RAD51Q06609 339 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 NFATC2Q13469 925 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 VWA2Q5GFL6 755 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 AFMIDQ63HM1 303 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 PWWP2BQ6NUJ5 590 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 OLFML1Q6UWY5 402 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 C1orf229Q6ZS94 237 aaPredicted RBP8.17□□□□□ -1.1
XRN1-212ENST00000486211 NLRP14Q86W24 1093 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 PLXDC1Q8IUK5 500 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
XRN1-212ENST00000486211 LINC00301Q8NCQ3 95 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 GRHL3Q8TE85 626 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 NT5C3BQ969T7 300 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 CPXM1Q96SM3 734 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 TBC1D10AQ9BXI6 508 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 SUV39H2Q9H5I1 410 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 PHPT1Q9NRX4 125 aaPredicted RBP8.17□□□□□ -1.1
XRN1-212ENST00000486211 LHX3Q9UBR4 397 aa8.17□□□□□ -1.1
XRN1-212ENST00000486211 FARSAQ9Y285 508 aaKnown RBP8.17□□□□□ -1.1
XRN1-212ENST00000486211 MDC1Q14676 2089 aaKnown RBP8.17□□□□□ -1.1
XRN1-212ENST00000486211 FER1L5A0AVI2 2057 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 TOX3O15405 576 aaPredicted RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 GRID2O43424 1007 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 ELFN1P0C7U0 828 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 RPL13P26373 211 aaKnown RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 MSX1P28360 303 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 ERCC5P28715 1186 aaPredicted RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 CA5AP35218 305 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 SEPHS1P49903 392 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 VAV2P52735 878 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 RHOAP61586 193 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 RPS15P62841 145 aaKnown RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 LLGL1Q15334 1064 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 ACBD5Q5T8D3 534 aaPredicted RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 FAM69BQ5VUD6 431 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 LYPLAL1Q5VWZ2 237 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 IZUMO3Q5VZ72 239 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 MYO7BQ6PIF6 2116 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 BRAT1Q6PJG6 821 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 FAM183BPQ6ZVS7 135 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 MED25Q71SY5 747 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 SLC26A9Q7LBE3 791 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 MRGPRGQ86SM5 289 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 PPP1R3BQ86XI6 285 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 ZNF808Q8N4W9 903 aaPredicted RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 WDTC1Q8N5D0 677 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 ZBTB2Q8N680 514 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 ARFGAP1Q8N6T3 406 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 GOLGA6L1Q8N7Z2 621 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 SPATA3Q8NHX4 192 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 PGAP3Q96FM1 320 aaPredicted RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 CCDC120Q96HB5 630 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 EXOC2Q96KP1 924 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 COQ10AQ96MF6 247 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 OR2M4Q96R27 311 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 SLX1AQ9BQ83 275 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 EPB41L1Q9H4G0 881 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 ZBTB20Q9HC78 741 aaPredicted RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 MCCC2Q9HCC0 563 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 DLL4Q9NR61 685 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 PPARGC1AQ9UBK2 798 aaKnown RBP8.16□□□□□ -1.1
XRN1-212ENST00000486211 NEU3Q9UQ49 428 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 CNTN6Q9UQ52 1028 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 MAPK8IP1Q9UQF2 711 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 NEU2Q9Y3R4 380 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 CSAG2Q9Y5P2 127 aa8.16□□□□□ -1.1
XRN1-212ENST00000486211 LILRA5A6NI73 299 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 K7ELQ4 463 aaPredicted RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 THAP12O43422 761 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 KDELR3O43731 214 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 BMP4P12644 408 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 KIR3DL1P43629 444 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 TLE4Q04727 773 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 ATP1A4Q13733 1029 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 STK38Q15208 465 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 PYCR3Q53H96 274 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 INO80DQ53TQ3 878 aaPredicted RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 DCAF17Q5H9S7 520 aaPredicted RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 DCAF10Q5QP82 559 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 XP32Q5T750 250 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 MANEALQ5VSG8 457 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 IYDQ6PHW0 289 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 DPPA4Q7L190 304 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 PRSS42Q7Z5A4 293 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms