RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TSACCQ96A04 125 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 ISG20Q96AZ6 181 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 ARL8AQ96BM9 186 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 ATXN7L3BQ96GX2 97 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 PRR11Q96HE9 360 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 CELF6Q96J87 481 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 LENG8Q96PV6 779 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 KCTD15Q96SI1 283 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RBM15Q96T37 977 aaKnown RBP eCLIP9.41□□□□□ -0.92e-7■■■■□ 21.6
TMEM39A-208ENST00000486159 MAGEH1Q9H213 219 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 CDC42EP4Q9H3Q1 356 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 CNOT10Q9H9A5 744 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 CWC15Q9P013 229 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 FETUBQ9UGM5 382 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 IPO11Q9UI26 975 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 SATB2Q9UPW6 733 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 HECTD1Q9ULT8 2610 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 ANKRD36A6QL64 1941 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RP1P56715 2156 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 A0A087WUV0 522 aaPredicted RBP9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 C5orf60A6NFR6 353 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 EEF2KO00418 725 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 RASGRF2O14827 1237 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 PPP1R12AO14974 1030 aaPredicted RBP9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 MUSKO15146 869 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 TSPAN6O43657 245 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 SPAG6O75602 509 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 POP4O95707 220 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 CDK4P11802 303 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 MX2P20592 715 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 EPHB2P29323 1055 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 SERPINB6P35237 376 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 MAGEA4P43358 317 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 RABIFP47224 123 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 VPS41P49754 854 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 HNRNPKP61978 463 aaKnown RBP eCLIP9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 SNRPD1P62314 119 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 CDK16Q00536 496 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 CCDC15Q0P6D6 951 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 PDK1Q15118 436 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 IRF4Q15306 451 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 C3orf38Q5JPI3 329 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 ARHGAP36Q6ZRI8 547 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 RD3Q7Z3Z2 195 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 CCDC25Q86WR0 208 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 PHACTR4Q8IZ21 702 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 PDIK1LQ8N165 341 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 CACTIN-AS1Q8N1I8 211 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 PELI3Q8N2H9 469 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 RTL3Q8N8U3 475 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 NAT8LQ8N9F0 302 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 FAM71DQ8N9W8 422 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 PLA2G15Q8NCC3 412 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 MAPK15Q8TD08 544 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 TFB1MQ8WVM0 346 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 TLCD1Q96CP7 247 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 HIC2Q96JB3 615 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 QKIQ96PU8 341 aaKnown RBP eCLIP9.4□□□□□ -0.99e-7■■■■□ 26.6
TMEM39A-208ENST00000486159 FAM118BQ9BPY3 351 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 LRRC61Q9BV99 259 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 SLC39A8Q9C0K1 460 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 USP29Q9HBJ7 922 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 ASCL3Q9NQ33 180 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 DONSONQ9NYP3 566 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 SIRPGQ9P1W8 387 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 MFHAS1Q9Y4C4 1052 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 ENTPD2Q9Y5L3 495 aa9.4□□□□□ -0.9
TMEM39A-208ENST00000486159 LRP4O75096 1905 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 EME2A4GXA9 379 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 A8MX80 341 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 E7ESA3 106 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 YY2O15391 372 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 RGS16O15492 202 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 RRP8O43159 456 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 SHOX2O60902 331 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 TM7SF2O76062 418 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 GSTA2P09210 222 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 NR1D1P20393 614 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 PHBP35232 272 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 FDFT1P37268 417 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 ETFBP38117 255 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 PDX1P52945 283 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 RHOAP61586 193 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 SARNPP82979 210 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 SRSF6Q13247 344 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 SERINC3Q13530 473 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 DPYSQ14117 519 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 PTPRRQ15256 657 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 HIF1AQ16665 826 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 ISXQ2M1V0 245 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 WSCD2Q2TBF2 565 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 ARHGAP40Q5TG30 622 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 FAXCQ5TGI0 409 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 NCBP2-AS2Q69YL0 99 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 ZCCHC8Q6NZY4 707 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 RFX8Q6ZV50 586 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 TAOK1Q7L7X3 1001 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms