RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 Q8N9G6 341 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-209ENST00000484305 IPMKQ8NFU5 416 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 OR6C4Q8NGE1 309 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 WDR48Q8TAF3 677 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 ZDHHC1Q8WTX9 485 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 PATE1Q8WXA2 126 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 ATXN7L3BQ96GX2 97 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 OR2M4Q96R27 311 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 GORASP1Q9BQQ3 440 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 SPATA16Q9BXB7 569 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 CDH19Q9H159 772 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 SYNDIG1Q9H7V2 258 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 VPS18Q9P253 973 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 LRIT1Q9P2V4 623 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 RSPH14Q9UHP6 348 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 ZNHIT2Q9UHR6 403 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 TRHDEQ9UKU6 1024 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 PRKAB1Q9Y478 270 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 ENTPD2Q9Y5L3 495 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 CAPN6Q9Y6Q1 641 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 RNF215Q9Y6U7 377 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 A0A1W2PNU3 283 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 A0A1W2PQM1 296 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 MIF4GDA9UHW6 222 aaKnown RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 TLX3O43711 291 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 TJP3O95049 919 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 ECEL1O95672 775 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 EPOP01588 193 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 RPLP0P05388 317 aaKnown RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 RBP3P10745 1247 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 CETN2P41208 172 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 ACTR1BP42025 376 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 MAZP56270 477 aaKnown RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 GSDMDP57764 484 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 DCDC1P59894 354 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 ACTR1AP61163 376 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 GABREP78334 506 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 MPP3Q13368 585 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 SLC1A5Q15758 541 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 ZNF648Q5T619 568 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 DARS2Q6PI48 645 aaKnown RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 C17orf82Q86X59 251 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 GALNT13Q8IUC8 556 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 CDKL3Q8IVW4 592 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 NAGSQ8N159 534 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 UBL4BQ8N7F7 174 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 GFM1Q96RP9 751 aaKnown RBP12.79□□□□□ -0.36
HDAC1-209ENST00000484305 GBA3Q9H227 469 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 LRRN3Q9H3W5 708 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 BPIFA1Q9NP55 256 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 ARFGAP3Q9NP61 516 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 APPL1Q9UKG1 709 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 ADGRG1Q9Y653 693 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 ZFHX4Q86UP3 3567 aa12.79□□□□□ -0.36
HDAC1-209ENST00000484305 CHD6Q8TD26 2715 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 PMS2P1A4D2B8 440 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 D6RAR5 112 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 KCNN4O15554 427 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 NUDT21O43809 227 aaKnown RBP12.78□□□□□ -0.36
HDAC1-209ENST00000484305 AGTP01019 485 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 PNLIPP16233 465 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 HMGCLP35914 325 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 LSSP48449 732 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 OLIG2Q13516 323 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 ZNF569Q5MCW4 686 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 ANKRD20A2Q5SQ80 823 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 ANKRD20A1Q5TYW2 823 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 ANKRD20A3Q5VUR7 823 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 C19orf48Q6RUI8 117 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 CHST15Q7LFX5 561 aaPredicted RBP12.78□□□□□ -0.36
HDAC1-209ENST00000484305 SPRED1Q7Z699 444 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 B3GNT8Q7Z7M8 397 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 CCNJLQ8IV13 435 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 ARL14Q8N4G2 192 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 TTC30BQ8N4P2 665 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 RNF10Q8N5U6 811 aaKnown RBP12.78□□□□□ -0.36
HDAC1-209ENST00000484305 TRAM1L1Q8N609 369 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 HNRNPLLQ8WVV9 542 aaKnown RBP12.78□□□□□ -0.36
HDAC1-209ENST00000484305 HES6Q96HZ4 224 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 SRPK1Q96SB4 655 aaKnown RBP12.78□□□□□ -0.36
HDAC1-209ENST00000484305 ZSCAN5AQ9BUG6 496 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 POLR1BQ9H9Y6 1135 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 RAD18Q9NS91 495 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 ATXN10Q9UBB4 475 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 NFKBIL1Q9UBC1 381 aaPredicted RBP12.78□□□□□ -0.36
HDAC1-209ENST00000484305 RALYQ9UKM9 306 aaKnown RBP12.78□□□□□ -0.36
HDAC1-209ENST00000484305 ATXN7L1Q9ULK2 861 aaPredicted RBP12.78□□□□□ -0.36
HDAC1-209ENST00000484305 GUCA1BQ9UMX6 200 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 SATB2Q9UPW6 733 aa12.78□□□□□ -0.36
HDAC1-209ENST00000484305 TCRBV7S2A1N4TA0A589 114 aa12.77□□□□□ -0.37
HDAC1-209ENST00000484305 B4GAT1O43505 415 aa12.77□□□□□ -0.37
HDAC1-209ENST00000484305 NUAK1O60285 661 aa12.77□□□□□ -0.37
HDAC1-209ENST00000484305 ANXA9O76027 345 aa12.77□□□□□ -0.37
HDAC1-209ENST00000484305 SLC25A14O95258 325 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-209ENST00000484305 ZNF8P17098 575 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-209ENST00000484305 HLA-DPA1P20036 260 aa12.77□□□□□ -0.37
HDAC1-209ENST00000484305 PSMB4P28070 264 aa12.77□□□□□ -0.37
HDAC1-209ENST00000484305 TNNT3P45378 269 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-209ENST00000484305 GEMP55040 296 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms