RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CCDC40Q4G0X9 1142 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 TMEM63BQ5T3F8 832 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 HECTD2Q5U5R9 776 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 STRIP1Q5VSL9 837 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 OLFML1Q6UWY5 402 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 MFSD7Q6UXD7 560 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 CACNA2D4Q7Z3S7 1137 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 HAUS6Q7Z4H7 955 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 TDRPQ86YL5 185 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 AFAP1Q8N556 730 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 FAM110DQ8TAY7 271 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 TMEM170AQ8WVE7 144 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 MIB2Q96AX9 1013 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 SPACA9Q96E40 222 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 C5orf30Q96GV9 206 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 TEFMQ96QE5 360 aaKnown RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 PRR25Q96S07 402 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 NEU1Q99519 415 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ZSWIM1Q9BR11 485 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 IFT27Q9BW83 186 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 TRIM2Q9C040 744 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 WDR26Q9H7D7 661 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 CNOT10Q9H9A5 744 aaKnown RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 AKIRIN1Q9H9L7 192 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 PRMT8Q9NR22 394 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 PAPOLBQ9NRJ5 636 aaKnown RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ARL8BQ9NVJ2 186 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ARL15Q9NXU5 204 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 COX16Q9P0S2 106 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 DNAJB4Q9UDY4 337 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 CCNL1Q9UK58 526 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-214ENST00000483925 AMFRQ9UKV5 643 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 CCPG1Q9ULG6 757 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 WDR37Q9Y2I8 494 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 CLCA3PQ9Y6N3 262 aa4.48□□□□□ -1.69
PTCD3-214ENST00000483925 ACEP12821 1306 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 SDR42E2A6NKP2 422 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 YDJCA8MPS7 323 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 AKR1B15C9JRZ8 316 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-214ENST00000483925 H0YIN7 160 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 IKBKBO14920 756 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 KIF1CO43896 1103 aaKnown RBP4.47□□□□□ -1.69
PTCD3-214ENST00000483925 JRKO75564 520 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 AKAP3O75969 853 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 CNTN5O94779 1100 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 MOCS3O95396 460 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 ERBB2P04626 1255 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 RLN1P04808 185 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 FESP07332 822 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 OR52Z1P0C646 297 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 CCDC159P0C7I6 412 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 VPREB1P12018 145 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 TGM2P21980 687 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 EPHB2P29323 1055 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 CASQ1P31415 396 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 CYP2C18P33260 490 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 STAT6P42226 847 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 MAGEA4P43358 317 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 CRKLP46109 303 aaKnown RBP4.47□□□□□ -1.69
PTCD3-214ENST00000483925 FASLGP48023 281 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 CAMLGP49069 296 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 HNMTP50135 292 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 TPTEP56180 551 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 SIRPAP78324 504 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 GPC5P78333 572 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 ITIH3Q06033 890 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 MZT1Q08AG7 82 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 TMED1Q13445 227 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 SPDYE7PQ495Y7 208 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 C6orf141Q5SZD1 244 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 TREML2Q5T2D2 321 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 ZNF618Q5T7W0 954 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 NEK5Q6P3R8 708 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 PSRC1Q6PGN9 363 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-214ENST00000483925 MEX3BQ6ZN04 569 aaKnown RBP4.47□□□□□ -1.69
PTCD3-214ENST00000483925 TBC1D26Q86UD7 250 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 FBXW8Q8N3Y1 598 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 ZCCHC9Q8N567 271 aaKnown RBP4.47□□□□□ -1.69
PTCD3-214ENST00000483925 B3GALNT2Q8NCR0 500 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 ROBO4Q8WZ75 1007 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 BCL2L2Q92843 193 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-214ENST00000483925 EXT2Q93063 718 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 MYEOVQ96EZ4 313 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 BOD1Q96IK1 185 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 GPR78Q96P69 363 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 SNX18Q96RF0 628 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 SIN3AQ96ST3 1273 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 PKP2Q99959 881 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 TMEM79Q9BSE2 394 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 ABHD14AQ9BUJ0 271 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 SLCO5A1Q9H2Y9 848 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 VPS37BQ9H9H4 285 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 EPB41L5Q9HCM4 733 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 PAG1Q9NWQ8 432 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.47□□□□□ -1.69
PTCD3-214ENST00000483925 GRHL1Q9NZI5 618 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 NLKQ9UBE8 527 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 CTNNAL1Q9UBT7 734 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 SLC24A2Q9UI40 661 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms