RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 TRIM38O00635 465 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 GAPDHSO14556 408 aaPredicted RBP16.14■□□□□ 0.17
COL2A1-206ENST00000483376 GIPC1O14908 333 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 TRIM16O95361 564 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 LDOC1O95751 146 aaPredicted RBP16.14■□□□□ 0.17
COL2A1-206ENST00000483376 FUCA1P04066 466 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 APRTP07741 180 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 CDK4P11802 303 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 FOXK2Q01167 660 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 ILKQ13418 452 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 ITGA9Q13797 1035 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 KCTD16Q68DU8 428 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 PHYKPLQ8IUZ5 450 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 EID2Q8N6I1 236 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 GPBAR1Q8TDU6 330 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 LMX1AQ8TE12 382 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 RUNDC3BQ96NL0 473 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 RANBP9Q96S59 729 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 BOCQ9BWV1 1114 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 TRIM39Q9HCM9 518 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 TOR4AQ9NXH8 423 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 SMARCAL1Q9NZC9 954 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 PCYOX1Q9UHG3 505 aa16.14■□□□□ 0.17
COL2A1-206ENST00000483376 BPTFQ12830 3046 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 GLYATL1P3A0A0U1RQE8 302 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 MROH6A6NGR9 719 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 SIGLEC6O43699 453 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 VEGFDO43915 354 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 GAS8O95995 478 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 SLC4A1P02730 911 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 CTSEP14091 401 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 CKMT2P17540 419 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 ACP1P24666 158 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 SIM1P81133 766 aaPredicted RBP16.13■□□□□ 0.17
COL2A1-206ENST00000483376 PEX6Q13608 980 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 LRP8Q14114 963 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 C6orf132Q5T0Z8 1188 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 ALS2CLQ60I27 953 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 NYAP1Q6ZVC0 841 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 PRUNE1Q86TP1 453 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 GKN2Q86XP6 184 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 OR4K2Q8NGD2 314 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 STYXQ8WUJ0 223 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 CNDP2Q96KP4 475 aaKnown RBP16.13■□□□□ 0.17
COL2A1-206ENST00000483376 CARS2Q9HA77 564 aaKnown RBP16.13■□□□□ 0.17
COL2A1-206ENST00000483376 CYP4F12Q9HCS2 524 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 BPIFA1Q9NP55 256 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 MRPL40Q9NQ50 206 aaKnown RBP16.13■□□□□ 0.17
COL2A1-206ENST00000483376 EVA1BQ9NVM1 165 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 SUFUQ9UMX1 484 aa16.13■□□□□ 0.17
COL2A1-206ENST00000483376 APOBEC2Q9Y235 224 aaKnown RBP16.13■□□□□ 0.17
COL2A1-206ENST00000483376 OAS3Q9Y6K5 1087 aaKnown RBP16.13■□□□□ 0.17
COL2A1-206ENST00000483376 CCDC188H7C350 402 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 CHUKO15111 745 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 INPP4BO15327 924 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 YY2O15391 372 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 NUAK1O60285 661 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 DNAJC6O75061 913 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 SLC25A14O95258 325 aaPredicted RBP16.12■□□□□ 0.17
COL2A1-206ENST00000483376 KRT14P02533 472 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 ANXA6P08133 673 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 ADRB1P08588 477 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 CKMT1AP12532 417 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 LMAN1P49257 510 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 XIAPP98170 497 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 KCNJ11Q14654 390 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 ATP13A5Q4VNC0 1218 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 PYCR3Q53H96 274 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 DNAAF3Q8N9W5 541 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 DDHD1Q8NEL9 900 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 OR52K1Q8NGK4 314 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 SCG3Q8WXD2 468 aaKnown RBP16.12■□□□□ 0.17
COL2A1-206ENST00000483376 GLMNQ92990 594 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 NLE1Q9NVX2 485 aaPredicted RBP16.12■□□□□ 0.17
COL2A1-206ENST00000483376 TMPRSS11EQ9UL52 423 aa16.12■□□□□ 0.17
COL2A1-206ENST00000483376 ZNF106Q9H2Y7 1883 aaKnown RBP16.12■□□□□ 0.17
COL2A1-206ENST00000483376 LY6G6EA0A0G2JKS1 128 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 SPAARA0A1B0GVQ0 90 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 HEATR9A2RTY3 570 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 ECEL1O95672 775 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 TUBB4AP04350 444 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 FTH1P19P0C7X4 201 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 ADRA1DP25100 572 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 ADCY8P40145 1251 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 PAFAH1B1P43034 410 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 ACADVLP49748 655 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 DUSP3P51452 185 aaPredicted RBP16.11■□□□□ 0.17
COL2A1-206ENST00000483376 BASP1P80723 227 aaKnown RBP16.11■□□□□ 0.17
COL2A1-206ENST00000483376 ILF3Q12906 894 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL2A1-206ENST00000483376 NFATC2Q13469 925 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 C1orf61Q13536 156 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 LDLRAP1Q5SW96 308 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 N4BP2L1Q5TBK1 243 aaPredicted RBP16.11■□□□□ 0.17
COL2A1-206ENST00000483376 OGFOD3Q6PK18 319 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 PPP1R21Q6ZMI0 780 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 SYDE1Q6ZW31 735 aaPredicted RBP16.11■□□□□ 0.17
COL2A1-206ENST00000483376 NLRP9Q7RTR0 991 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 RD3Q7Z3Z2 195 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 TRIM74Q86UV6 250 aa16.11■□□□□ 0.17
COL2A1-206ENST00000483376 GALNT13Q8IUC8 556 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms