RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 N4BP2L1Q5TBK1 243 aaPredicted RBP20.75■□□□□ 0.91
SEC13-217ENST00000482647 LVRNQ6Q4G3 990 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 GKN2Q86XP6 184 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 CREG2Q8IUH2 290 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 OR4K2Q8NGD2 314 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 OR52K1Q8NGK4 314 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 GRK7Q8WTQ7 553 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 GLYATL1Q969I3 302 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 SCARF2Q96GP6 870 aaPredicted RBP20.75■□□□□ 0.91
SEC13-217ENST00000482647 C19orf43Q9BQ61 176 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 EIF2B3Q9NR50 452 aaKnown RBP20.75■□□□□ 0.91
SEC13-217ENST00000482647 VPS18Q9P253 973 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 RNF14Q9UBS8 474 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 KCTD3Q9Y597 815 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 CACNA1AO00555 2505 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 PCNX2A6NKB5 2137 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 FUCA1P04066 466 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 GNPDA1P46926 289 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 PTPRCAPQ14761 206 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 TRIP13Q15645 432 aaPredicted RBP20.74■□□□□ 0.91
SEC13-217ENST00000482647 DEFB133Q30KQ1 61 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 PROX2Q3B8N5 592 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 ZCCHC8Q6NZY4 707 aaKnown RBP20.74■□□□□ 0.91
SEC13-217ENST00000482647 FAM151BQ6UXP7 276 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 FAM181AQ8N9Y4 354 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 VPS35Q96QK1 796 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 TMEM168Q9H0V1 697 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 TRIM39Q9HCM9 518 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 PIH1D1Q9NWS0 290 aaKnown RBP20.74■□□□□ 0.91
SEC13-217ENST00000482647 TRNAU1APQ9NX07 287 aaKnown RBP20.74■□□□□ 0.91
SEC13-217ENST00000482647 NCKIPSDQ9NZQ3 722 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 APPL1Q9UKG1 709 aa20.74■□□□□ 0.91
SEC13-217ENST00000482647 APOBEC2Q9Y235 224 aaKnown RBP20.74■□□□□ 0.91
SEC13-217ENST00000482647 SPTBN2O15020 2390 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 LDB2O43679 373 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 FTH1P19P0C7X4 201 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 CKMT2P17540 419 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 CASQ1P31415 396 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 PAFAH1B1P43034 410 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 GPS1Q13098 491 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 LAMB3Q13751 1172 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 ITGA9Q13797 1035 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 POU6F1Q14863 301 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 TCEA2Q15560 299 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 CHRNA6Q15825 494 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 ATP13A5Q4VNC0 1218 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 MARK2Q7KZI7 788 aaKnown RBP20.73■□□□□ 0.91
SEC13-217ENST00000482647 TAF8Q7Z7C8 310 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 GALNT13Q8IUC8 556 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 PHYKPLQ8IUZ5 450 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 SUDS3Q9H7L9 328 aaPredicted RBP20.73■□□□□ 0.91
SEC13-217ENST00000482647 RMI1Q9H9A7 625 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 CASS4Q9NQ75 786 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 EVA1BQ9NVM1 165 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 GPSM3Q9Y4H4 160 aa20.73■□□□□ 0.91
SEC13-217ENST00000482647 OAS3Q9Y6K5 1087 aaKnown RBP20.73■□□□□ 0.91
SEC13-217ENST00000482647 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.72■□□□□ 0.91
SEC13-217ENST00000482647 GPR89AB7ZAQ6 455 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 AP3B1O00203 1094 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 FANCGO15287 622 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 CELA2BP08218 269 aaPredicted RBP20.72■□□□□ 0.91
SEC13-217ENST00000482647 GPR89BP0CG08 455 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 HADHAP40939 763 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 VPS41P49754 854 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 ZNF140P52738 457 aaPredicted RBP20.72■□□□□ 0.91
SEC13-217ENST00000482647 CDK16Q00536 496 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 ILF3Q12906 894 aaKnown RBP eCLIP20.72■□□□□ 0.91
SEC13-217ENST00000482647 SEPT6Q14141 434 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 ZNF398Q8TD17 642 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 PTCD2Q8WV60 388 aaKnown RBP20.72■□□□□ 0.91
SEC13-217ENST00000482647 GLMNQ92990 594 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 APOLD1Q96LR9 279 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 GSDMCQ9BYG8 508 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 ZNHIT2Q9UHR6 403 aa20.72■□□□□ 0.91
SEC13-217ENST00000482647 TRIM16O95361 564 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 PRAMEF1O95521 474 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 ECEL1O95672 775 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 CKMT1AP12532 417 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 ADCY8P40145 1251 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 GRIA1P42261 906 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 DUSP3P51452 185 aaPredicted RBP20.71■□□□□ 0.91
SEC13-217ENST00000482647 TMPRSS15P98073 1019 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 DAB2P98082 770 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 DNAJC3Q13217 504 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 PYCR3Q53H96 274 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 C6orf132Q5T0Z8 1188 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 CERCAMQ5T4B2 595 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 SYT10Q6XYQ8 523 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 GDAP1Q8TB36 358 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 GPBAR1Q8TDU6 330 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 TRIM44Q96DX7 344 aaPredicted RBP20.71■□□□□ 0.91
SEC13-217ENST00000482647 OR2M4Q96R27 311 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 BOCQ9BWV1 1114 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 OR2AG1Q9H205 316 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 ARFGAP3Q9NP61 516 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 ATXN10Q9UBB4 475 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 FKBPLQ9UIM3 349 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 NEU2Q9Y3R4 380 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 PCDHGA1Q9Y5H4 931 aa20.71■□□□□ 0.91
SEC13-217ENST00000482647 TP53BP1Q12888 1972 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms