RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PRLP01236 227 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 FGF1P05230 155 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 LIPCP11150 499 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 HLA-DPA1P20036 260 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 UGT1A5P35504 534 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 CLCNKAP51800 687 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 RAB15P59190 212 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 CXADRP78310 365 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 PDE1BQ01064 536 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 ZFP36L1Q07352 338 aaKnown RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 VAC14Q08AM6 782 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 NIPAL4Q0D2K0 466 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 SLC10A2Q12908 348 aaPredicted RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 ZBTB17Q13105 803 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 MPP3Q13368 585 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 TAZQ16635 292 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 PHF19Q5T6S3 580 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 CCDC181Q5TID7 509 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 ITPRIPL1Q6GPH6 555 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 CYB5D1Q6P9G0 228 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 XKR5Q6UX68 686 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 LYSMD3Q7Z3D4 306 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 DAAM2Q86T65 1068 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 SLC9B2Q86UD5 537 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 RBM12BQ8IXT5 1001 aaKnown RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCM2-213ENST00000480658 TC2NQ8N9U0 490 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 ZSCAN1Q8NBB4 408 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 BRSK1Q8TDC3 778 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 SCAMP4Q969E2 229 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 TEKT5Q96M29 485 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 TEFMQ96QE5 360 aaKnown RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 SPATA16Q9BXB7 569 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 FSD1LQ9BXM9 530 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 ASPSCR1Q9BZE9 553 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 SARS2Q9NP81 518 aaKnown RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 KCNK4Q9NYG8 393 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 KLHL8Q9P2G9 620 aaPredicted RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 FAM153AQ9UHL3 310 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 ZNHIT2Q9UHR6 403 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 ALG6Q9Y672 507 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 MYLKQ15746 1914 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 APC2O95996 2303 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 APOC4-APOC2K7ER74 178 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 NUAK1O60285 661 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 ANXA9O76027 345 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 SLC25A14O95258 325 aaPredicted RBP11.35□□□□□ -0.59
CCM2-213ENST00000480658 APOC2P02655 101 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 MMP2P08253 660 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 CTNNA2P26232 953 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 ITPKBP27987 946 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 ALDH4A1P30038 563 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 PTPN7P35236 360 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 HMGCLP35914 325 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 DYNLT1P63172 113 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 ITGA9Q13797 1035 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 GTF2H3Q13889 308 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 GALNT3Q14435 633 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 TCEA2Q15560 299 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 FOXR1Q6PIV2 292 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 WDR74Q6RFH5 385 aaPredicted RBP11.35□□□□□ -0.59
CCM2-213ENST00000480658 MFSD7Q6UXD7 560 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 SPOCD1Q6ZMY3 1216 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 CCDC81Q6ZN84 652 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 NRROSQ86YC3 692 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 JAMLQ86YT9 394 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 SLITRK4Q8IW52 837 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 SYCE1Q8N0S2 351 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 SFRP1Q8N474 314 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 CNTD1Q8N815 330 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 Q8N9G6 341 aaPredicted RBP11.35□□□□□ -0.59
CCM2-213ENST00000480658 AGBL5Q8NDL9 886 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 TADA1Q96BN2 335 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 VPS35Q96QK1 796 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 TRIB3Q96RU7 358 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 SLC38A3Q99624 504 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 C19orf43Q9BQ61 176 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 TIMM29Q9BSF4 260 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 GLOD4Q9HC38 313 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 TRIM39Q9HCM9 518 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 SPATS2LQ9NUQ6 558 aaKnown RBP11.35□□□□□ -0.59
CCM2-213ENST00000480658 RABGEF1Q9UJ41 708 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 ATXN7L1Q9ULK2 861 aaPredicted RBP11.35□□□□□ -0.59
CCM2-213ENST00000480658 ZNF711Q9Y462 761 aa11.35□□□□□ -0.59
CCM2-213ENST00000480658 TDRD6O60522 2096 aaKnown RBP11.35□□□□□ -0.59
CCM2-213ENST00000480658 SHROOM3Q8TF72 1996 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 COL27A1Q8IZC6 1860 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 hCG_1818297A0A087WSY0 165 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 GOLGA6L9A6NEM1 432 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 KMOO15229 486 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 INPP4BO15327 924 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 GRID2O43424 1007 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 DNAJC6O75061 913 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 TJP3O95049 919 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 PTMAP06454 111 aaKnown RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 PYGMP11217 842 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms