RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 LCLAT1Q6UWP7 414 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 LARP4Q71RC2 724 aaKnown RBP eCLIP4.69□□□□□ -1.666e-9■■■□□ 18.1
CKS1B-207ENST00000477676 INTS8Q75QN2 995 aaKnown RBP4.69□□□□□ -1.66
CKS1B-207ENST00000477676 TAC4Q86UU9 113 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 GLCCI1Q86VQ1 547 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 MFN1Q8IWA4 741 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 SLC22A18ASQ8N1D0 253 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 CARNMT1Q8N4J0 409 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 EXD3Q8N9H8 876 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 KDM1BQ8NB78 822 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 HJURPQ8NCD3 748 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-207ENST00000477676 FBXL13Q8NEE6 735 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 OR4C6Q8NH72 309 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 LMO3Q8TAP4 145 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 RNF139Q8WU17 664 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 SNRNP27Q8WVK2 155 aaKnown RBP4.69□□□□□ -1.66
CKS1B-207ENST00000477676 MAGEB10Q96LZ2 347 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-207ENST00000477676 GBP4Q96PP9 640 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 SRPK1Q96SB4 655 aaKnown RBP4.69□□□□□ -1.66
CKS1B-207ENST00000477676 LGMNQ99538 433 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 PRMT1Q99873 361 aaKnown RBP4.69□□□□□ -1.66
CKS1B-207ENST00000477676 MYOCQ99972 504 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 OMDQ99983 421 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 GOLPH3LQ9H4A5 285 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 LRRC4Q9HBW1 653 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 FZD3Q9NPG1 666 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 CNGB3Q9NQW8 809 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 ABCC13Q9NSE7 274 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 OLA1Q9NTK5 396 aaKnown RBP4.69□□□□□ -1.66
CKS1B-207ENST00000477676 PNMA8BQ9ULN7 279 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-207ENST00000477676 SCML1Q9UN30 329 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 NAALADL1Q9UQQ1 740 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 NCKAP1Q9Y2A7 1128 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 FRMD4BQ9Y2L6 1034 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 OR51B4Q9Y5P0 310 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 CREBBPQ92793 2442 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 AKAP9Q99996 3911 aa4.69□□□□□ -1.66
CKS1B-207ENST00000477676 MED13Q9UHV7 2174 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3DA0A087WVF3 549 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3IA0A087WXS9 549 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3EA0A087X179 549 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3KA0A087X1G2 549 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 FAM237AA0A1B0GTK4 181 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3FA6NER0 549 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3LB9A6J9 549 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 I6L893 689 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ZNF561-AS1K7EIQ3 104 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 MATN2O00339 956 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 SCDO00767 359 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 SLC31A1O15431 190 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 YKT6O15498 198 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 FFAR2O15552 330 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 IRAK2O43187 625 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 SMAD6O43541 496 aaKnown RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 USP12O75317 370 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CSO75390 466 aaKnown RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 PIAS2O75928 621 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 MOCS2O96007 188 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 MT-CO1P00395 513 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 IL1BP01584 269 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ASLP04424 464 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 AMY2AP04746 511 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3HP0C7X1 549 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 SETSIPP0DME0 302 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 VDRP11473 427 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CDK4P11802 303 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CKMT1AP12532 417 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CD19P15391 556 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 PDGFRAP16234 1089 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 AMY2BP19961 511 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 C5AR1P21730 350 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TGM2P21980 687 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 LSSP48449 732 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 SLC11A2P49281 568 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ARRB1P49407 418 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 NDUFA8P51970 172 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 PDX1P52945 283 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CLDN2P57739 230 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 SRSF1Q07955 248 aaKnown RBP eCLIP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 LRMPQ12912 555 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 DUSP8Q13202 625 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 DRAP1Q14919 205 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 E2F5Q15329 346 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CNGA2Q16280 664 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ZNF284Q2VY69 593 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ZNF542PQ5EBM4 170 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 RAP1GAP2Q684P5 730 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 NUGGCQ68CJ6 796 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3GQ6DHY5 549 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3CQ6IPX1 549 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 GCNT7Q6ZNI0 430 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 C14orf80Q86SX3 495 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 IQCHQ86VS3 1027 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TRIM69Q86WT6 500 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ARHGEF19Q8IW93 802 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 UNC45BQ8IWX7 931 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CEP57L1Q8IYX8 460 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D3Q8IZP1 549 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 LGI2Q8N0V4 545 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms