RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 EPYCQ99645 322 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PITHD1Q9GZP4 211 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 ACTL8Q9H568 366 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 CAAP1Q9H8G2 361 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 MRM3Q9HC36 420 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PRODH2Q9UF12 536 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TRPM3Q9HCF6 1732 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 A0A087X0T9 212 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 A0A1W2PRU2 124 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 A6NCN8 305 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 SAC3D1A6NKF1 404 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 FCHO1O14526 889 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TRIM3O75382 744 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 KCNH1O95259 989 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 FAM228BP0C875 321 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 HGFP14210 728 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 IL12BP29460 328 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 FMO4P31512 558 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 NUBP1P53384 320 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 RPS3AP61247 264 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 WDR5P61964 334 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 ZNF33BQ06732 778 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 HSPA14Q0VDF9 509 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 RPA4Q13156 261 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PKP1Q13835 747 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PTPRNQ16849 979 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 MYLK3Q32MK0 819 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 SLC10A6Q3KNW5 377 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 SGO1Q5FBB7 561 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 UBXN11Q5T124 520 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 GTF2IRD2BQ6EKJ0 949 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 DRICH1Q6PGQ1 229 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 FOXR1Q6PIV2 292 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 DNM1P34Q6PK57 102 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 MBOAT1Q6ZNC8 495 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 GTF2IRD2Q86UP8 949 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 FAM124AQ86V42 546 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 EXOC3L1Q86VI1 746 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 BPHLQ86WA6 291 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 DEPDC4Q8N2C3 294 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 SVOPQ8N4V2 548 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 EMC1Q8N766 993 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 DENND6BQ8NEG7 585 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 HNRNPLLQ8WVV9 542 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PSMG2Q969U7 264 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 CLIP3Q96DZ5 547 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 SLC38A2Q96QD8 506 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 OR2M4Q96R27 311 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 FCRL5Q96RD9 977 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PHF7Q9BWX1 381 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TDRD1Q9BXT4 1180 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 RHOJQ9H4E5 214 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 ZNF576Q9H609 170 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PTGES2Q9H7Z7 377 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 AGO3Q9H9G7 860 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 CDHR5Q9HBB8 845 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PCDHB16Q9NRJ7 776 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 GPATCH2LQ9NWQ4 482 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 DNAJC28Q9NX36 388 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 LEF1Q9UJU2 399 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TELO2Q9Y4R8 837 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PIAS3Q9Y6X2 628 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 RGPD5Q99666 1765 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 SNED1Q8TER0 1413 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TMEM191CA6NGB0 347 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 HEPACAM2A8MVW5 462 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 FOXN1O15353 648 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 B4GALT5O43286 388 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 CLEC3AO75596 197 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 VAPBO95292 243 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 IL4RP24394 825 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TARSP26639 723 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 CCR8P51685 355 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PPP3CAQ08209 521 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 FUT2Q10981 343 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 MRPL49Q13405 166 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 MTM1Q13496 603 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 DSG2Q14126 1118 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 RCN1Q15293 331 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TEAD2Q15562 447 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 RFX4Q33E94 735 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 UAP1L1Q3KQV9 507 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 XKR6Q5GH73 641 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 ZFP1Q6P2D0 407 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 CASP12Q6UXS9 341 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 CHRDL2Q6WN34 429 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 GPRIN3Q6ZVF9 776 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 LRRC70Q7Z2Q7 622 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 GRASPQ7Z6J2 395 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 CAPSLQ8WWF8 208 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TOP1MTQ969P6 601 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 BMFQ96LC9 184 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 PAFAH2Q99487 392 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 LPIN3Q9BQK8 851 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 SLC4A5Q9BY07 1137 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 TM6SF2Q9BZW4 377 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 LRRC19Q9H756 370 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 MRPS30Q9NP92 439 aaKnown RBP4.6□□□□□ -1.67
CCNL1-215ENST00000474539 UBP1Q9NZI7 540 aa4.6□□□□□ -1.67
CCNL1-215ENST00000474539 NENFQ9UMX5 172 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms