RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ACBD6Q9BR61 282 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 C1QTNF3Q9BXJ4 246 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SP110Q9HB58 689 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF287Q9HBT7 754 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 MAGEE1Q9HCI5 957 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 GJB4Q9NTQ9 266 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 BARHL2Q9NY43 387 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CNIH4Q9P003 139 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CTSFQ9UBX1 484 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 USP18Q9UMW8 372 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 DNAJC16Q9Y2G8 782 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 AP4B1Q9Y6B7 739 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 KIAA1217Q5T5P2 1943 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 FUOMA2VDF0 154 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ANKRD34BA5PLL1 514 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 AIM2O14862 343 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 HNRNPDLO14979 420 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 POLR1CO15160 346 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PRPF4O43172 522 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 DENRO43583 198 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ATP9AO75110 1047 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SMNDC1O75940 238 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PDE8BO95263 885 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 LINGO3P0C6S8 592 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PLA2G2AP14555 144 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CCND2P30279 289 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 GRIA2P42262 883 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 HARS2P49590 506 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 NPY4RP50391 375 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CRYBB1P53674 252 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 RPS3AP61247 264 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ADAM17P78536 824 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SCGB2A2Q13296 93 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 DRP2Q13474 957 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 BCL7AQ4VC05 210 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PDCD4Q53EL6 469 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PLA1AQ53H76 456 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PPM1JQ5JR12 505 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ATG16L1Q676U5 607 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PAOXQ6QHF9 649 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 UNC5AQ6ZN44 842 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 KDM8Q8N371 416 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ASCC1Q8N9N2 400 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 FAM181AQ8N9Y4 354 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 FNDC5Q8NAU1 212 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF397Q8NF99 534 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC44A1Q8WWI5 657 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PTPRN2Q92932 1015 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CCDC51Q96ER9 411 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SAMD8Q96LT4 415 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 INPP4AQ96PE3 977 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 POP1Q99575 1024 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 MTIF3Q9H2K0 278 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 KCNF1Q9H3M0 494 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 VSX1Q9NZR4 365 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 NDUFAF4Q9P032 175 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 MARCH4Q9P2E8 410 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PI4KBQ9UBF8 816 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 HBS1LQ9Y450 684 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 LRRC42Q9Y546 428 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 RAI2Q9Y5P3 530 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 MYH14Q7Z406 1995 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SMIM30A4D0T7 59 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 BTBD17A6NE02 478 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CENPBD1B2RD01 187 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PRSS44E7EML9 344 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 AKR7A2O43488 359 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 DTNBO60941 627 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CILPO75339 1184 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SORBS2O94875 1100 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 PCCBP05166 539 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 KRT8P05787 483 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 UQCRFS1P1P0C7P4 283 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF888P0CJ79 500 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC1A6P48664 564 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SMCPP49901 116 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC26A2P50443 739 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 RASGEF1BQ0VAM2 473 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 DGCR6Q14129 220 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 GPR68Q15743 365 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 RALGPS1Q5JS13 557 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ARHGEF16Q5VV41 709 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 ABHD17CQ6PCB6 329 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 UNQ6494/PRO21346Q6UXR6 183 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 RTL4Q6ZR62 310 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 LYSMD3Q7Z3D4 306 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 AMZ2Q86W34 360 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 NELFCDQ8IXH7 590 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CEP112Q8N8E3 955 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 BPIFCQ8NFQ6 507 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 OR6B3Q8NGW1 331 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 HCAR2Q8TDS4 363 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 SYTL5Q8TDW5 730 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 CHURC1Q8WUH1 139 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 WDR60Q8WVS4 1066 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 TSEN15Q8WW01 171 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 KIAA1143Q96AT1 154 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 GCNAQ96QF7 691 aa6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 NAA11Q9BSU3 229 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-208ENST00000474246 TMEM117Q9H0C3 514 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms