RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NRDCO43847 1150 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 SLC25A14O95258 325 aaPredicted RBP20.32■□□□□ 0.84
SNX13-206ENST00000474067 MT-CYBP00156 380 aaPredicted RBP20.32■□□□□ 0.84
SNX13-206ENST00000474067 FGF1P05230 155 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 KDELC2Q7Z4H8 507 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 PIM3Q86V86 326 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 DTX3LQ8TDB6 740 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 ATXN7L3BQ96GX2 97 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 CMKLR1Q99788 373 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 HERPUD2Q9BSE4 406 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 ZCCHC2Q9C0B9 1178 aaKnown RBP20.32■□□□□ 0.84
SNX13-206ENST00000474067 SATB2Q9UPW6 733 aa20.32■□□□□ 0.84
SNX13-206ENST00000474067 LOC285095A0A1B0GVY8 99 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 OR5K4A6NMS3 321 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 NFKB1P19838 968 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 HMGCLP35914 325 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 WNT3AP56704 352 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 CCL7P80098 99 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 GPLD1P80108 840 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 WASHC5Q12768 1159 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 IHHQ14623 411 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 PTPRRQ15256 657 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 MAP9Q49MG5 647 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 RAD9BQ6WBX8 426 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 SPRED1Q7Z699 444 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 C17orf82Q86X59 251 aaPredicted RBP20.31■□□□□ 0.84
SNX13-206ENST00000474067 RNF10Q8N5U6 811 aaKnown RBP20.31■□□□□ 0.84
SNX13-206ENST00000474067 SPATA22Q8NHS9 363 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 CCL4L1Q8NHW4 92 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 BRSK1Q8TDC3 778 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 HNRNPLLQ8WVV9 542 aaKnown RBP20.31■□□□□ 0.84
SNX13-206ENST00000474067 KRT35Q92764 455 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 HEMGNQ9BXL5 484 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 DPH1Q9BZG8 443 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 EPB41L5Q9HCM4 733 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 TRIM39Q9HCM9 518 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 SHOC2Q9UQ13 582 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 TMEM98Q9Y2Y6 226 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 PKP3Q9Y446 797 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 RNF215Q9Y6U7 377 aa20.31■□□□□ 0.84
SNX13-206ENST00000474067 ACACAQ13085 2346 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 VEGFDO43915 354 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 CPNE6O95741 557 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 SLC4A1P02730 911 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 ITGA2BP08514 1039 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 JMJD7P0C870 316 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 VCLP18206 1134 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 POLD2P49005 469 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 PDE1BQ01064 536 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 GTF2H3Q13889 308 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 NR1D2Q14995 579 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 KCTD16Q68DU8 428 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 MARK2Q7KZI7 788 aaKnown RBP20.3■□□□□ 0.84
SNX13-206ENST00000474067 RAB11FIP2Q7L804 512 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 ZNF438Q7Z4V0 828 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 NRROSQ86YC3 692 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 ZNF567Q8N184 647 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 GLYATL1Q969I3 302 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 TTC25Q96NG3 672 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 SLC46A1Q96NT5 459 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.3■□□□□ 0.84
SNX13-206ENST00000474067 GBA3Q9H227 469 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 SPATS2LQ9NUQ6 558 aaKnown RBP20.3■□□□□ 0.84
SNX13-206ENST00000474067 TFR2Q9UP52 801 aa20.3■□□□□ 0.84
SNX13-206ENST00000474067 KIR2DS5A0A0G2JLQ3 304 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 A0A0G2JNG1 304 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 KIR2DS3K7RE56 304 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 PLD2O14939 933 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 GRID2O43424 1007 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 KRT86O43790 486 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 NUAK1O60285 661 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 ECEL1O95672 775 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 RBP3P10745 1247 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 AK4P27144 223 aaPredicted RBP20.29■□□□□ 0.84
SNX13-206ENST00000474067 FASLGP48023 281 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 MARCKSL1P49006 195 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 EIF3EP60228 445 aaKnown RBP20.29■□□□□ 0.84
SNX13-206ENST00000474067 OTUD4Q01804 1114 aaKnown RBP20.29■□□□□ 0.84
SNX13-206ENST00000474067 ITGA9Q13797 1035 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 KIR2DS5Q14953 304 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 LLGL1Q15334 1064 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 COL28A1Q2UY09 1125 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 DARS2Q6PI48 645 aaKnown RBP20.29■□□□□ 0.84
SNX13-206ENST00000474067 RFLNAQ6ZTI6 216 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 CHST15Q7LFX5 561 aaPredicted RBP20.29■□□□□ 0.84
SNX13-206ENST00000474067 GLT6D1Q7Z4J2 308 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 SLC9B2Q86UD5 537 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 GAS2L3Q86XJ1 694 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 FBXO39Q8N4B4 442 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 Q8N9G6 341 aaPredicted RBP20.29■□□□□ 0.84
SNX13-206ENST00000474067 ACRBPQ8NEB7 543 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 CCDC112Q8NEF3 446 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 ACTL9Q8TC94 416 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 AHCYL2Q96HN2 611 aaKnown RBP20.29■□□□□ 0.84
SNX13-206ENST00000474067 VPS35Q96QK1 796 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 AGAP2Q99490 1192 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 ZMYND15Q9H091 742 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 UBP1Q9NZI7 540 aa20.29■□□□□ 0.84
SNX13-206ENST00000474067 FEZ2Q9UHY8 353 aaPredicted RBP20.29■□□□□ 0.84
SNX13-206ENST00000474067 AKAP13Q12802 2813 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms