RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CFAP99D6REC4 459 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PSMD11O00231 422 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 POLR1CO15160 346 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SOCS5O75159 536 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GADD45BO75293 160 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GFPT2O94808 682 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SORBS2O94875 1100 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 CPP00450 1065 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 F12P00748 615 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 ANKRD34CP0C6C1 535 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GOLGA6DP0CG33 693 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 UNGP13051 313 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF28P17035 718 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TNFAIP3P21580 790 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 DLSTP36957 453 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PPM1FP49593 454 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SCNN1BP51168 640 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF143P52747 638 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 EPHA4P54764 986 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 AIF1P55008 147 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TPI1P60174 286 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 RPL7AP62424 266 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 HHEXQ03014 270 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 DPTQ07507 201 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 NFATC2Q13469 925 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 LRP8Q14114 963 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 ERV3-1Q14264 604 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 RFTN1Q14699 578 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 NAA30Q147X3 362 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PTPRRQ15256 657 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 LINC01559Q495D7 138 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PYCR3Q53H96 274 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 DENND2CQ68D51 928 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 RAET1GQ6H3X3 334 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SCYL2Q6P3W7 929 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 ADAMTSL4Q6UY14 1074 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TRIM72Q6ZMU5 477 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 RFLNAQ6ZTI6 216 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 Q6ZVL8 140 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 MARK2Q7KZI7 788 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 MON1BQ7L1V2 547 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TRIM46Q7Z4K8 759 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TECPR1Q7Z6L1 1165 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TMEM135Q86UB9 458 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TSPAN33Q86UF1 283 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TRIM74Q86UV6 250 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GALNT13Q8IUC8 556 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 NPWQ8N729 165 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PAF1Q8N7H5 531 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 CPT1CQ8TCG5 803 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 FNIP1Q8TF40 1166 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 NCSTNQ92542 709 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 RNF31Q96EP0 1072 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 COX14Q96I36 57 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 MCEEQ96PE7 176 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 MCCC1Q96RQ3 725 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PCDHB18PQ96TA0 734 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TUBGCP2Q9BSJ2 902 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 CNPY3Q9BT09 278 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SELENOOQ9BVL4 669 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 ULBP3Q9BZM4 244 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GANQ9H2C0 597 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 RUBCNLQ9H714 662 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SP110Q9HB58 689 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SARS2Q9NP81 518 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GPATCH2LQ9NWQ4 482 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GOLGA6AQ9NYA3 693 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 ADAM22Q9P0K1 906 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TBC1D29Q9UFV1 150 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TLK1Q9UKI8 766 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 POLHQ9Y253 713 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TMEM98Q9Y2Y6 226 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PCDHGC4Q9Y5F7 938 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PCDHGA6Q9Y5G7 932 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 PCYT1BQ9Y5K3 369 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 OAS3Q9Y6K5 1087 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF106Q9H2Y7 1883 aaKnown RBP5.09□□□□□ -1.6
SNRNP40-204ENST00000474025 F8P00451 2351 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 POLEQ07864 2286 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 MAP1AP78559 2803 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 TRBV23OR9-2A0A075B6M9 112 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 A0A0U1RQS6 177 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 A0A1W2PQ67 120 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CDC14CA4D256 554 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 LILRA5A6NI73 299 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 DFFAO00273 331 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 EEF2KO00418 725 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 PES1O00541 588 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 DNAJC6O75061 913 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 DNAJB5O75953 348 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 PGLSO95336 258 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 PEX11BO96011 259 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 C9P02748 559 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CALB1P05937 261 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CYP2A6P11509 494 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 TNFRSF8P28908 595 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 SOX5P35711 763 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 DCTP40126 519 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 MAPK9P45984 424 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms