RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 LYSMD3Q7Z3D4 306 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 SPRED1Q7Z699 444 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 MRPL10Q7Z7H8 261 aaKnown RBP21.01■□□□□ 0.95
COL18A1-207ENST00000473212 UMODL1-AS1Q8N2C9 162 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 DCBLD1Q8N8Z6 715 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 SEPT8Q92599 483 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 VPS33AQ96AX1 596 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 SLC39A13Q96H72 371 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 HIPK3Q9H422 1215 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 SOX17Q9H6I2 414 aaPredicted RBP21.01■□□□□ 0.95
COL18A1-207ENST00000473212 FAM50BQ9Y247 325 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 FADS3Q9Y5Q0 445 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 MT-ND1P03886 318 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 HNRNPCP07910 306 aaKnown RBP eCLIP21.01■□□□□ 0.95
COL18A1-207ENST00000473212 BLOC1S3Q6QNY0 202 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 BEND5Q7L4P6 421 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 CROCCP3Q8IVE0 287 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 NSMCE3Q96MG7 304 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 SEMA4BQ9NPR2 832 aaPredicted RBP21.01■□□□□ 0.95
COL18A1-207ENST00000473212 TDRKHQ9Y2W6 561 aaKnown RBP21.01■□□□□ 0.95
COL18A1-207ENST00000473212 PATJQ8NI35 1801 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 A0A0U1RQS6 177 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 TRIM64A6NGJ6 449 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 NCF1BA6NI72 391 aaPredicted RBP21■□□□□ 0.95
COL18A1-207ENST00000473212 NCF1CA8MVU1 366 aaPredicted RBP21■□□□□ 0.95
COL18A1-207ENST00000473212 GIPC1O14908 333 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 MATN4O95460 622 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 NCF1P14598 390 aaPredicted RBP21■□□□□ 0.95
COL18A1-207ENST00000473212 VARSP26640 1264 aaKnown RBP21■□□□□ 0.95
COL18A1-207ENST00000473212 GSK3BP49841 420 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 TBX4P57082 545 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 TUSC3Q13454 348 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 FUT11Q495W5 492 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 TMTC4Q5T4D3 741 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 GPR107Q5VW38 600 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 LRRC49Q8IUZ0 686 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 TMEM125Q96AQ2 219 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 SERPINB11Q96P15 392 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 ASB2Q96Q27 587 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 ZYG11BQ9C0D3 744 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 SLC52A3Q9NQ40 469 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 GALPQ9UBC7 116 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 TNPO2O14787 897 aaKnown RBP21■□□□□ 0.95
COL18A1-207ENST00000473212 ZNF37AP17032 561 aaPredicted RBP21■□□□□ 0.95
COL18A1-207ENST00000473212 MGAT3Q09327 533 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 NFYCQ13952 458 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 PLA2G4EQ3MJ16 856 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 THEM5Q8N1Q8 247 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 SYT17Q9BSW7 474 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 ALG2Q9H553 416 aa21■□□□□ 0.95
COL18A1-207ENST00000473212 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21■□□□□ 0.95
COL18A1-207ENST00000473212 SH3PXD2BA1X283 911 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 ZNF701M0R085 212 aaPredicted RBP20.99■□□□□ 0.95
COL18A1-207ENST00000473212 CD3EAPO15446 510 aaKnown RBP20.99■□□□□ 0.95
COL18A1-207ENST00000473212 CLASP2O75122 1294 aaKnown RBP20.99■□□□□ 0.95
COL18A1-207ENST00000473212 RAB39AQ14964 217 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 PTPRRQ15256 657 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 ANKDD1AQ495B1 522 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 ABRAXAS1Q6UWZ7 409 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 DCP1BQ8IZD4 617 aaKnown RBP20.99■□□□□ 0.95
COL18A1-207ENST00000473212 GOLM1Q8NBJ4 401 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 ATAD1Q8NBU5 361 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 MAGEE2Q8TD90 523 aaPredicted RBP20.99■□□□□ 0.95
COL18A1-207ENST00000473212 NUDT8Q8WV74 236 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 PIF1Q9H611 641 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 RPF2Q9H7B2 306 aaKnown RBP20.99■□□□□ 0.95
COL18A1-207ENST00000473212 POLR1BQ9H9Y6 1135 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 SLAMF8Q9P0V8 285 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 ZNHIT2Q9UHR6 403 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 V9GYQ6 96 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 H3BMQ9 156 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 BAIAP3O94812 1187 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 GLP2RO95838 553 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 GPIP06744 558 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 CDKN1CP49918 316 aaPredicted RBP20.99■□□□□ 0.95
COL18A1-207ENST00000473212 AGTR2P50052 363 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 CFAP52Q8N1V2 620 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 DHRSXQ8N5I4 330 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 SUSD3Q96L08 255 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 COG8Q96MW5 612 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 ATOH8Q96SQ7 321 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 CYP2S1Q96SQ9 504 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 TLR6Q9Y2C9 796 aa20.99■□□□□ 0.95
COL18A1-207ENST00000473212 SCN10AQ9Y5Y9 1956 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 UBA6A0AVT1 1052 aaPredicted RBP20.98■□□□□ 0.95
COL18A1-207ENST00000473212 IDO1P14902 403 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 EEF1DP29692 281 aaKnown RBP20.98■□□□□ 0.95
COL18A1-207ENST00000473212 RFC2P35250 354 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 YAP1P46937 504 aaKnown RBP20.98■□□□□ 0.95
COL18A1-207ENST00000473212 LIPEQ05469 1076 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 CYBRD1Q53TN4 286 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 TMEM26Q6ZUK4 368 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 CHST15Q7LFX5 561 aaPredicted RBP20.98■□□□□ 0.95
COL18A1-207ENST00000473212 ZNF554Q86TJ5 538 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 SERINC5Q86VE9 423 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 KCTD14Q9BQ13 255 aaPredicted RBP20.98■□□□□ 0.95
COL18A1-207ENST00000473212 NAA50Q9GZZ1 169 aaKnown RBP20.98■□□□□ 0.95
COL18A1-207ENST00000473212 SMPD3Q9NY59 655 aaPredicted RBP20.98■□□□□ 0.95
COL18A1-207ENST00000473212 NOD1Q9Y239 953 aa20.98■□□□□ 0.95
COL18A1-207ENST00000473212 FNDC3AQ9Y2H6 1198 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms