RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SAR1BQ9Y6B6 198 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 KNTC1P50748 2209 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 PKD1L2Q7Z442 2459 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 APC2O95996 2303 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 SPTY2D1-AS1A0A0U1RR47 76 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 A0A1W2PQ67 120 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 C5orf60A6NFR6 353 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 NEMP1O14524 444 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 TSPAN6O43657 245 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 TLX3O43711 291 aaPredicted RBP9.13□□□□□ -0.95
SMC4-213ENST00000472282 FZD6O60353 706 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 PMPCBO75439 489 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 IFNB1P01574 187 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 C1SP09871 688 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 JUPP14923 745 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 CTPS1P17812 591 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 MMP12P39900 470 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 KCNJ1P48048 391 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 SUOXP51687 545 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 EPHB1P54762 984 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 PFN3P60673 137 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 DAB2P98082 770 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 ELP6Q0PNE2 266 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 PDE1CQ14123 709 aaPredicted RBP9.13□□□□□ -0.95
SMC4-213ENST00000472282 PCSK7Q16549 785 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 ERAP2Q6P179 960 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 DRICH1Q6PGQ1 229 aaPredicted RBP9.13□□□□□ -0.95
SMC4-213ENST00000472282 KDELC1Q6UW63 502 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 ARHGEF18Q6ZSZ5 1173 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 PRUNE1Q86TP1 453 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 TAB3Q8N5C8 712 aaPredicted RBP9.13□□□□□ -0.95
SMC4-213ENST00000472282 ZNF548Q8NEK5 533 aaPredicted RBP9.13□□□□□ -0.95
SMC4-213ENST00000472282 LPCAT1Q8NF37 534 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 PIH1D2Q8WWB5 315 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 TADA1Q96BN2 335 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 CENPTQ96BT3 561 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 RTP4Q96DX8 246 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 SMIM14Q96QK8 99 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 GORASP1Q9BQQ3 440 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 WRAP53Q9BUR4 548 aaKnown RBP9.13□□□□□ -0.95
SMC4-213ENST00000472282 PCDH9Q9HC56 1237 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 B4GALT6Q9UBX8 382 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 FAM153AQ9UHL3 310 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 PHTF1Q9UMS5 762 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 COQ6Q9Y2Z9 468 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 URB1O60287 2271 aaKnown RBP9.13□□□□□ -0.95
SMC4-213ENST00000472282 ACACAQ13085 2346 aa9.13□□□□□ -0.95
SMC4-213ENST00000472282 A0A0J9YYE9 177 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 GOLGA6L10A0A0M3HER8 536 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 A8MX80 341 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 K7ESM1 405 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 FPGTO14772 594 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 PHF2O75151 1096 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 GCATO75600 419 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 PRLP01236 227 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 TRBC1P01850 177 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 CSF2P04141 144 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 ALPIP09923 528 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 ARAFP10398 606 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 ETS1P14921 441 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 NME1P15531 152 aaKnown RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 GEMP55040 296 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 WNT3AP56704 352 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 POLR2LP62875 67 aaKnown RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 CDK18Q07002 472 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 RALGDSQ12967 914 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 MPP3Q13368 585 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 C1orf61Q13536 156 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 GALNT3Q14435 633 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 PTPRRQ15256 657 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 CYP1B1Q16678 543 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 KCTD19Q17RG1 926 aaPredicted RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 P3H1Q32P28 736 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 TMEM52BQ4KMG9 183 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 FAXCQ5TGI0 409 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 TTC27Q6P3X3 843 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 C1orf229Q6ZS94 237 aaPredicted RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 DPPA4Q7L190 304 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 KDELC2Q7Z4H8 507 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 NLRP8Q86W28 1048 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 PARGQ86W56 976 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 CREG2Q8IUH2 290 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 CCDC89Q8N998 374 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 GLIS1Q8NBF1 620 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 TP53I13Q8NBR0 393 aaPredicted RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 IPMKQ8NFU5 416 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 CXorf40AQ8TE69 158 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 ASB12Q8WXK4 309 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 MAGOHBQ96A72 148 aaKnown RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 FUBP1Q96AE4 644 aaKnown RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 IFT43Q96FT9 208 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 LENG8Q96PV6 779 aaPredicted RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 MCCC1Q96RQ3 725 aaPredicted RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 TRIB3Q96RU7 358 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 MLPHQ9BV36 600 aaPredicted RBP9.12□□□□□ -0.95
SMC4-213ENST00000472282 FSD1LQ9BXM9 530 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 HOMER3Q9NSC5 361 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 NLGN3Q9NZ94 848 aa9.12□□□□□ -0.95
SMC4-213ENST00000472282 DRG1Q9Y295 367 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms