RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 TRIM58Q8NG06 486 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 MAPK15Q8TD08 544 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 ATG4AQ8WYN0 398 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 NAT6Q93015 286 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 PPP1R2P1Q96PQ5 205 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 PLEKHG4BQ96PX9 1271 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 OR2M4Q96R27 311 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 APOL2Q9BQE5 337 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 CCDC3Q9BQI4 270 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 ZSCAN5AQ9BUG6 496 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 FRMD8P1Q9BZ68 369 aaPredicted RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 CARD9Q9H257 536 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 TRIM39Q9HCM9 518 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 ARFGAP3Q9NP61 516 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 IL17CQ9P0M4 197 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 VPS18Q9P253 973 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 ATXN10Q9UBB4 475 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 NFKBIL1Q9UBC1 381 aaPredicted RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 ZNHIT2Q9UHR6 403 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 PRKAB1Q9Y478 270 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 PLEKHM1Q9Y4G2 1056 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 PCYT1BQ9Y5K3 369 aaPredicted RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 CACNA1AO00555 2505 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 TMEM8BA6NDV4 472 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 B4DGG1 531 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 CASC3O15234 703 aaKnown RBP9.07□□□□□ -0.96
SYN3-211ENST00000472027 BUD23O43709 281 aaKnown RBP9.07□□□□□ -0.96
SYN3-211ENST00000472027 NUAK1O60285 661 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 USP12O75317 370 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 MSLNQ13421 630 aaPredicted RBP9.07□□□□□ -0.96
SYN3-211ENST00000472027 SNX1Q13596 522 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 SPARCL1Q14515 664 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 HLTFQ14527 1009 aaKnown RBP eCLIP9.07□□□□□ -0.96
SYN3-211ENST00000472027 PTPRCAPQ14761 206 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 OASLQ15646 514 aaKnown RBP9.07□□□□□ -0.96
SYN3-211ENST00000472027 ST3GAL2Q16842 350 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 ATP13A5Q4VNC0 1218 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 C14orf28Q4W4Y0 310 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 ZNF569Q5MCW4 686 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 ZDHHC20Q5W0Z9 365 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 KCTD11Q693B1 232 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 PDPK2PQ6A1A2 396 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 DENND5AQ6IQ26 1287 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 SLC30A9Q6PML9 568 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 ARHGEF18Q6ZSZ5 1173 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 CHST15Q7LFX5 561 aaPredicted RBP9.07□□□□□ -0.96
SYN3-211ENST00000472027 ADGRG6Q86SQ4 1221 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 GALNT13Q8IUC8 556 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 KLHDC8BQ8IXV7 354 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 OR6C4Q8NGE1 309 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 BRSK1Q8TDC3 778 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 ZDHHC1Q8WTX9 485 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 C1orf54Q8WWF1 131 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 GLYATL1Q969I3 302 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 CCDC74AQ96AQ1 378 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 LRRC45Q96CN5 670 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 TBL1YQ9BQ87 522 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 TLR10Q9BXR5 811 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 RMI1Q9H9A7 625 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 ARNT2Q9HBZ2 717 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 IL26Q9NPH9 171 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.07□□□□□ -0.96
SYN3-211ENST00000472027 TAAR2Q9P1P5 351 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 LRIT1Q9P2V4 623 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 RABGEF1Q9UJ41 708 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 TMPRSS11EQ9UL52 423 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 ZNF148Q9UQR1 794 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 PKP3Q9Y446 797 aa9.07□□□□□ -0.96
SYN3-211ENST00000472027 PLXNB3Q9ULL4 1909 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 C2orf81A6NN90 581 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 STX7O15400 261 aaKnown RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 PSMD3O43242 534 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 GRID2O43424 1007 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A9O60656 530 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 PPFIA2O75334 1257 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 ECEL1O95672 775 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 PNLIPP16233 465 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 GLB1P16278 677 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 ZNF8P17098 575 aaPredicted RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A6P19224 532 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 LPOP22079 712 aaPredicted RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A1P22309 533 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A4P22310 534 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 CXCR5P32302 372 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A3P35503 534 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A5P35504 534 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 SPAM1P38567 509 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 ACTR1BP42025 376 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 MAZP56270 477 aaKnown RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 ACTR1AP61163 376 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 CCL7P80098 99 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 CYP4F3Q08477 520 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 TMEM115Q12893 351 aaPredicted RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 PEX6Q13608 980 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 LRP8Q14114 963 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 SIX1Q15475 284 aaPredicted RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 TAF1AQ15573 450 aaPredicted RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 CHRNA6Q15825 494 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 CCNG2Q16589 344 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 P3H1Q32P28 736 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms