RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CCDC26Q8TAB7 109 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 FAM71BQ8TC56 605 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 BPIFB1Q8TDL5 484 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 IFT81Q8WYA0 676 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 GFM2Q969S9 779 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 AZIN2Q96A70 460 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 RSPRY1Q96DX4 576 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 MSLNLQ96KJ4 702 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 WDR92Q96MX6 357 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 LRRC3BQ96PB8 259 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 LGMNQ99538 433 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 PRMT1Q99873 361 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TRIM51Q9BSJ1 452 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TMEM121Q9BTD3 319 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 RPP25Q9BUL9 199 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 BBS2Q9BXC9 721 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 OSBPL6Q9BZF3 934 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 QRSL1Q9H0R6 528 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 OR10A2Q9H208 303 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 DPH5Q9H2P9 285 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 EBF3Q9H4W6 596 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 ZCCHC4Q9H5U6 513 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 UBE2ZQ9H832 354 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 ZFP14Q9HCL3 533 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 HOMER3Q9NSC5 361 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TMEM51Q9NW97 253 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 GDE1Q9NZC3 331 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 RCOR3Q9P2K3 495 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 AMACRQ9UHK6 382 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 PRSS50Q9UI38 385 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 DNPEPQ9ULA0 475 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TTC7AQ9ULT0 858 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 CLEC4EQ9ULY5 219 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SNX24Q9Y343 169 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 DOCK6Q96HP0 2047 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 COL4A4P53420 1690 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 GREB1Q4ZG55 1949 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 PATJQ8NI35 1801 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PDE4DIPQ5VU43 2346 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 A0A0D9SEW6 157 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 ARHGAP42A6NI28 874 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 RASA4BC9J798 803 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 J3KR12 359 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 APOC4-APOC2K7ER74 178 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 KCNK1O00180 336 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC9A3R1O14745 358 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 TRIM24O15164 1050 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 RASA4O43374 803 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 MBTPS2O43462 519 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 RAD51CO43502 376 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 RAMP2O60895 175 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 H2AFYO75367 372 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 CLDN11O75508 207 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 HEXIM1O94992 359 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 LATS1O95835 1130 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 JCHAINP01591 159 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 KRT14P02533 472 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 APOC2P02655 101 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 LPLP06858 475 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 ARSAP15289 507 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 XPAP23025 273 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 CHRNA3P32297 505 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PTPN7P35236 360 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 SERPINB6P35237 376 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 CSKP41240 450 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 NR2C2P49116 596 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 LMAN1P49257 510 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 ZNF135P52742 658 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 LGALS4P56470 323 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 NRG3P56975 720 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 DR1Q01658 176 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 GUCY2DQ02846 1103 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 TFF2Q03403 129 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 SEMA3BQ13214 749 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 CDH18Q13634 790 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 NFYCQ13952 458 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 POLD3Q15054 466 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PAFAH1B3Q15102 231 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PDK1Q15118 436 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 NOMO1Q15155 1222 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 TRADDQ15628 312 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 ERCC6LQ2NKX8 1250 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 FSCBQ5H9T9 825 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 LY6G5CQ5SRR4 150 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 SYCP2LQ5T4T6 812 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 C8orf74Q6P047 294 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 RHBDF2Q6PJF5 856 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 VITQ6UXI7 678 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 BZW1Q7L1Q6 419 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PID1Q7Z2X4 250 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 MAATS1Q7Z4T9 603 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 CDKL3Q8IVW4 592 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 GLB1L2Q8IW92 636 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 MFN1Q8IWA4 741 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 MFSD6LQ8IWD5 586 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 CCDC13Q8IYE1 715 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 ZNF683Q8IZ20 524 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 CPXM2Q8N436 756 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms