RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 EIF3DO15371 548 aaKnown RBP eCLIP5.91□□□□□ -1.46
NCL-208ENST00000466274 NUDT21O43809 227 aaKnown RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 REC8O95072 547 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 GCNT3O95395 438 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 CTDNEP1O95476 244 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 SLPIP03973 132 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 BPIP17213 487 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 TSPAN7P41732 249 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 STAT1P42224 750 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 GDF5P43026 501 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 SGSHP51688 502 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 METAP1P53582 386 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 MYL6P60660 151 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 PPP2R2AP63151 447 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 NUCB2P80303 420 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ART3Q13508 389 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 FXNQ16595 210 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ARHGAP44Q17R89 818 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ZNF699Q32M78 642 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 EDRF1Q3B7T1 1238 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 TMEM119Q4V9L6 283 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 BMP2KLQ5H9B9 411 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 CERCAMQ5T4B2 595 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 PIP5KL1Q5T9C9 394 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 SEL1L3Q68CR1 1132 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 JMJD6Q6NYC1 403 aaPredicted RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 RFWD3Q6PCD5 774 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 CEACAM20Q6UY09 585 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ERN2Q76MJ5 926 aaKnown RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 RBFAQ8N0V3 343 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ESX1Q8N693 406 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 DENND6BQ8NEG7 585 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 TMIEQ8NEW7 156 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ATL2Q8NHH9 583 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 RASSF8Q8NHQ8 419 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 PCDH19Q8TAB3 1148 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 PHOSPHO1Q8TCT1 267 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ERCC4Q92889 916 aaPredicted RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 AZIN2Q96A70 460 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 CYFIP2Q96F07 1278 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 CBWD1Q9BRT8 395 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ZNF747Q9BV97 191 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 C1QTNF7Q9BXJ2 289 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 EDEM3Q9BZQ6 932 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 UBXN6Q9BZV1 441 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 SMYD3Q9H7B4 428 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 CAAP1Q9H8G2 361 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 BARX1Q9HBU1 254 aaPredicted RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 FAM49BQ9NUQ9 324 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 LRIT1Q9P2V4 623 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 SLC25A13Q9UJS0 675 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 KCND3Q9UK17 655 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 ZFR2Q9UPR6 939 aaKnown RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 DAAM1Q9Y4D1 1078 aa5.91□□□□□ -1.46
NCL-208ENST00000466274 PCDHGA9Q9Y5G4 932 aaKnown RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 KLF2Q9Y5W3 355 aaPredicted RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 ZFC3H1O60293 1989 aaKnown RBP5.91□□□□□ -1.46
NCL-208ENST00000466274 NIPBLQ6KC79 2804 aaeCLIP5.9□□□□□ -1.462e-43■■■■■ 31.5
NCL-208ENST00000466274 A6NCN8 305 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 KRIT1O00522 736 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 ACSL4O60488 711 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 PPP6R2O75170 966 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 RASGRP1O95267 797 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 GAP43P17677 238 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 HTR1BP28222 390 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 ACVRL1P37023 503 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 UBA7P41226 1012 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 HK3P52790 923 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 HMGA2P52926 109 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 PFN3P60673 137 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 BIRC2Q13490 618 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 SEMA5AQ13591 1074 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 ERV3-1Q14264 604 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 AMZ1Q400G9 498 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 VWA2Q5GFL6 755 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 ATP1A1-AS1Q5TC04 95 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 MACC1Q6ZN28 852 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 STXBP4Q6ZWJ1 553 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 RHOT1Q8IXI2 618 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 UNC5BQ8IZJ1 945 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 IQCKQ8N0W5 287 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 C12orf29Q8N999 325 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 GLIS1Q8NBF1 620 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 ZSWIM2Q8NEG5 633 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 GPR156Q8NFN8 814 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 ASB12Q8WXK4 309 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 THAP4Q8WY91 577 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 PNPLA2Q96AD5 504 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 C8orf76Q96K31 380 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 DUSP16Q9BY84 665 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 CLPBQ9H078 707 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 MEGF9Q9H1U4 602 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 VPS11Q9H270 941 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 IKZF4Q9H2S9 585 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 SLC6A20Q9NP91 592 aa5.9□□□□□ -1.46
NCL-208ENST00000466274 ANKHD1Q8IWZ3 2542 aaKnown RBP5.89□□□□□ -1.47
NCL-208ENST00000466274 IGHV5-10-1A0A0J9YXX1 117 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 A0A1B0GUH1 482 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 GOLGA6L7A0A1B0GV03 622 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 PIPSLA2A3N6 862 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms