RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ASMTLO95671 621 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 ECEL1O95672 775 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 LDOC1O95751 146 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 FUCA1P04066 466 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 GIMD1P0DJR0 217 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 ALPPL2P10696 532 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 KCNA4P22459 653 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 POU6F1Q14863 301 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 ELOCQ15369 112 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 CHRNA6Q15825 494 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 FAM151BQ6UXP7 276 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 FSTL5Q8N475 847 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 OR4C6Q8NH72 309 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 GLYATL1Q969I3 302 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 C19orf43Q9BQ61 176 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 DUSP23Q9BVJ7 150 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 CLPBQ9H078 707 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 CARS2Q9HA77 564 aaKnown RBP14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 CASS4Q9NQ75 786 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 NLGN3Q9NZ94 848 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 SUFUQ9UMX1 484 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 OAS3Q9Y6K5 1087 aaKnown RBP14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 SPAARA0A1B0GVQ0 90 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 LMO7DNF2Z398 122 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 TPP1O14773 563 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 SIGLEC6O43699 453 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 IVLP07476 585 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 ANXA6P08133 673 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 TPSB2P20231 275 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 HADHAP40939 763 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 GNPDA1P46926 289 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNF140P52738 457 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 TERF1P54274 439 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 CDK16Q00536 496 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 SEPT6Q14141 434 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 PPP1R7Q15435 360 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 TPSAB1Q15661 275 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 ATP13A5Q4VNC0 1218 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 CERCAMQ5T4B2 595 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 GLRX5Q86SX6 157 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 SDR16C5Q8N3Y7 309 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 OR13C4Q8NGS5 318 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 PTCD2Q8WV60 388 aaKnown RBP14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 CNDP2Q96KP4 475 aaKnown RBP14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 C16orf45Q96MC5 204 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 VPS35Q96QK1 796 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 TMEM168Q9H0V1 697 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 SUDS3Q9H7L9 328 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 TRIM39Q9HCM9 518 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 VPS18Q9P253 973 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 FTSJ1Q9UET6 329 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 PCYOX1Q9UHG3 505 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 FKBPLQ9UIM3 349 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 APPL1Q9UKG1 709 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 DOLKQ9UPQ8 538 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 BPTFQ12830 3046 aa14.39□□□□□ -0.11
SQSTM1-205ENST00000464493 MROH6A6NGR9 719 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 CCDC188H7C350 402 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 AP3B1O00203 1094 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 GAPDHSO14556 408 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 YY2O15391 372 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 TNFSF14O43557 240 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A9O60656 530 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 SRP72O76094 671 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 CELA2BP08218 269 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A6P19224 532 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A1P22309 533 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A4P22310 534 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A3P35503 534 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A5P35504 534 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 SIM1P81133 766 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 SARNPP82979 210 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 TMPRSS15P98073 1019 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 LAMB3Q13751 1172 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 ITGA9Q13797 1035 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 TCEA2Q15560 299 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 DEFB133Q30KQ1 61 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 MARK2Q7KZI7 788 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 GKN2Q86XP6 184 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 PHYKPLQ8IUZ5 450 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 KLHL7Q8IXQ5 586 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNF398Q8TD17 642 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 STYXQ8WUJ0 223 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 SCG3Q8WXD2 468 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 SLCO2A1Q92959 643 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 RUNDC3BQ96NL0 473 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 RMI1Q9H9A7 625 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A7Q9HAW7 530 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A10Q9HAW8 530 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 UGT1A8Q9HAW9 530 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 ARFGAP3Q9NP61 516 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 NLE1Q9NVX2 485 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 TRNAU1APQ9NX07 287 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 ATXN10Q9UBB4 475 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNHIT2Q9UHR6 403 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 TMPRSS11EQ9UL52 423 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 GPSM3Q9Y4H4 160 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms