RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 SQSTM1Q13501 440 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 LAMB3Q13751 1172 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 ITGA9Q13797 1035 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 KIR2DS5Q14953 304 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 PCSK7Q16549 785 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 PYCR3Q53H96 274 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 LYSMD3Q7Z3D4 306 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 TMC3Q7Z5M5 1100 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 SLC9B2Q86UD5 537 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 ZC3H18Q86VM9 953 aaKnown RBP13.34□□□□□ -0.27
COMMD3-205ENST00000463688 SCAMP4Q969E2 229 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 AHCYL2Q96HN2 611 aaKnown RBP13.34□□□□□ -0.27
COMMD3-205ENST00000463688 ZNF514Q96K75 400 aaPredicted RBP13.34□□□□□ -0.27
COMMD3-205ENST00000463688 NSMCE3Q96MG7 304 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
COMMD3-205ENST00000463688 ZNF711Q9Y462 761 aa13.34□□□□□ -0.27
COMMD3-205ENST00000463688 LOC285095A0A1B0GVY8 99 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 C5orf60A6NFR6 353 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 D6RAR5 112 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 TAF4O00268 1085 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 PLD2O14939 933 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 HGSO14964 777 aaPredicted RBP13.33□□□□□ -0.28
COMMD3-205ENST00000463688 KMOO15229 486 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 KRT37O76014 449 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 GAS8O95995 478 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 FASLGP48023 281 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 WNT3AP56704 352 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 NR1D2Q14995 579 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 MAP9Q49MG5 647 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 LDLRAP1Q5SW96 308 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 DARS2Q6PI48 645 aaKnown RBP13.33□□□□□ -0.28
COMMD3-205ENST00000463688 DOK6Q6PKX4 331 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 SLC30A9Q6PML9 568 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 RAB11FIP2Q7L804 512 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 ZNF438Q7Z4V0 828 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 C17orf82Q86X59 251 aaPredicted RBP13.33□□□□□ -0.28
COMMD3-205ENST00000463688 CPNE8Q86YQ8 564 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 RBM12BQ8IXT5 1001 aaKnown RBP13.33□□□□□ -0.28
COMMD3-205ENST00000463688 FBXO39Q8N4B4 442 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 OR10G6Q8NH81 332 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 HEXDCQ8WVB3 486 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 SLC46A1Q96NT5 459 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 VPS35Q96QK1 796 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 TRIB3Q96RU7 358 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 SLC38A3Q99624 504 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 MRPL40Q9NQ50 206 aaKnown RBP13.33□□□□□ -0.28
COMMD3-205ENST00000463688 CD84Q9UIB8 345 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 HYOU1Q9Y4L1 999 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 PCDHGA7Q9Y5G6 932 aa13.33□□□□□ -0.28
COMMD3-205ENST00000463688 EIF4E1BA6NMX2 242 aaKnown RBP13.32□□□□□ -0.28
COMMD3-205ENST00000463688 F8W8V4 182 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 GRID2O43424 1007 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 NUAK1O60285 661 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 NOBOXO60393 691 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 CRTAMO95727 393 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 RALBP11234 206 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 EIF3EP60228 445 aaKnown RBP13.32□□□□□ -0.28
COMMD3-205ENST00000463688 WASHC5Q12768 1159 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 GALNT3Q14435 633 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 NOMO1Q15155 1222 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 P3H1Q32P28 736 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 PERM1Q5SV97 790 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 CYB5D1Q6P9G0 228 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 NPNTQ6UXI9 565 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 SPRED1Q7Z699 444 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 BEND7Q8N7W2 519 aaPredicted RBP13.32□□□□□ -0.28
COMMD3-205ENST00000463688 LSM14AQ8ND56 463 aaKnown RBP13.32□□□□□ -0.28
COMMD3-205ENST00000463688 GLYATL1Q969I3 302 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 GBA3Q9H227 469 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 PNMA8BQ9ULN7 279 aaPredicted RBP13.32□□□□□ -0.28
COMMD3-205ENST00000463688 PCDHB11Q9Y5F2 797 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 ENTPD2Q9Y5L3 495 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 DNMT3AQ9Y6K1 912 aaPredicted RBP13.32□□□□□ -0.28
COMMD3-205ENST00000463688 PKD1L2Q7Z442 2459 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 FRYQ5TBA9 3013 aa13.32□□□□□ -0.28
COMMD3-205ENST00000463688 INPP4BO15327 924 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 DUX1O43812 170 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 SOD1P00441 154 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 MPOP05164 745 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 CELA2BP08218 269 aaPredicted RBP13.31□□□□□ -0.28
COMMD3-205ENST00000463688 RBP3P10745 1247 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 ALDH4A1P30038 563 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 STIP1P31948 543 aaKnown RBP13.31□□□□□ -0.28
COMMD3-205ENST00000463688 HADHAP40939 763 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 EPHA4P54764 986 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 TMPRSS3P57727 454 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 CCL7P80098 99 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 SLC1A5Q15758 541 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 C3orf38Q5JPI3 329 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 GLT6D1Q7Z4J2 308 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 LRRTM4Q86VH4 590 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 ZNF567Q8N184 647 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 KCNE4Q8WWG9 221 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 ATXN7L3BQ96GX2 97 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 ALS2CR12Q96Q35 445 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 TIMM29Q9BSF4 260 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 HEMGNQ9BXL5 484 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 ZMYND15Q9H091 742 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms