RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 DRG1Q9Y295 367 aaKnown RBP10.51□□□□□ -0.73
TRAPPC12-213ENST00000461577 CPED1A4D0V7 1026 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 USP27XA6NNY8 438 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 PPFIA2O75334 1257 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 DKK1O94907 266 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 AP2A1O95782 977 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 TOP3BO95985 862 aaKnown RBP10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 GAS8O95995 478 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ETS1P14921 441 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 SPINK2P20155 84 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ADCY8P40145 1251 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 SHC2P98077 582 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 PDE1BQ01064 536 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 E2F1Q01094 437 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ILF3Q12906 894 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 PEX6Q13608 980 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 KCTD11Q693B1 232 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 FAM151BQ6UXP7 276 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 C4orf22Q6V702 233 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 PPP1R21Q6ZMI0 780 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 EFL1Q7Z2Z2 1120 aaKnown RBP10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 PRUNE1Q86TP1 453 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 LINC00523Q86TU6 105 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 PHYKPLQ8IUZ5 450 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 KLHDC8BQ8IXV7 354 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 GALNT15Q8N3T1 639 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 RASGEF1CQ8N431 466 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ARL10Q8N8L6 244 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 FAM46DQ8NEK8 389 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 GDAP1Q8TB36 358 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 IFI44Q8TCB0 444 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 GLYATL1Q969I3 302 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 SCARF2Q96GP6 870 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 MS4A14Q96JA4 679 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 OSBPL9Q96SU4 736 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 SCNM1Q9BWG6 230 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 DPEP2Q9H4A9 486 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 RMI1Q9H9A7 625 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ETNK1Q9HBU6 452 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ARNT2Q9HBZ2 717 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ARFGAP3Q9NP61 516 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 RAB6BQ9NRW1 208 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 TRNAU1APQ9NX07 287 aaKnown RBP10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 VPS18Q9P253 973 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ZNHIT2Q9UHR6 403 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 ARL5AQ9Y689 179 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 OAS3Q9Y6K5 1087 aaKnown RBP10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 PTPRBP23467 1997 aa10.5□□□□□ -0.73
TRAPPC12-213ENST00000461577 GLYATL1P3A0A0U1RQE8 302 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 ERI2A8K979 691 aaKnown RBP10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 B4DGG1 531 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 PGRMC1O00264 195 aaKnown RBP10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 FUCA1P04066 466 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 ZSCAN5DPP0CG00 497 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 AK4P27144 223 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 RPL22P35268 128 aaKnown RBP10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 KCNJ1P48048 391 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 GNG11P61952 73 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 CTBSQ01459 385 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 ITGA9Q13797 1035 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 GTF2H3Q13889 308 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 SEPT6Q14141 434 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 CHRNA6Q15825 494 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 PYCR3Q53H96 274 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 ZNF648Q5T619 568 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 DENND5AQ6IQ26 1287 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 GUSBP11Q6P575 273 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 SLC30A9Q6PML9 568 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 SLC35F3Q8IY50 421 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 PRELID2Q8N945 189 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 DNAAF3Q8N9W5 541 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 KYQ8NBH2 561 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 OR4K2Q8NGD2 314 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 CCL4L1Q8NHW4 92 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 GPBAR1Q8TDU6 330 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 PTCD2Q8WV60 388 aaKnown RBP10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 NAT6Q93015 286 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 MAGOHBQ96A72 148 aaKnown RBP10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 VPS35Q96QK1 796 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 ABCG4Q9H172 646 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 OR2AG1Q9H205 316 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 TRIM39Q9HCM9 518 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 IL26Q9NPH9 171 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 ATXN10Q9UBB4 475 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 KLK13Q9UKR3 277 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 TTC7AQ9ULT0 858 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 PADI4Q9UM07 663 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 SNX12Q9UMY4 172 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 NEUROG3Q9Y4Z2 214 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 SPTBN2O15020 2390 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 CACNA1AO00555 2505 aa10.49□□□□□ -0.73
TRAPPC12-213ENST00000461577 MYLKQ15746 1914 aa10.48□□□□□ -0.73
TRAPPC12-213ENST00000461577 ZFC3H1O60293 1989 aaKnown RBP10.48□□□□□ -0.73
TRAPPC12-213ENST00000461577 GOLGA4Q13439 2230 aaKnown RBP10.48□□□□□ -0.73
TRAPPC12-213ENST00000461577 LY6G6EA0A0G2JKS1 128 aa10.48□□□□□ -0.73
TRAPPC12-213ENST00000461577 GOLGA6L10A0A0M3HER8 536 aa10.48□□□□□ -0.73
TRAPPC12-213ENST00000461577 EME2A4GXA9 379 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC12-213ENST00000461577 CES2O00748 559 aa10.48□□□□□ -0.73
TRAPPC12-213ENST00000461577 GRID2O43424 1007 aa10.48□□□□□ -0.73
TRAPPC12-213ENST00000461577 VEGFDO43915 354 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms