RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 DUSP10Q9Y6W6 482 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 BTNL10A8MVZ5 291 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 DNAJC6O75061 913 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 ASMTLO95671 621 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 SLC4A1P02730 911 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 NFKB1P19838 968 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 RBMS1P29558 406 aaKnown RBP18.77■□□□□ 0.6
COL5A1-203ENST00000460264 CCKBRP32239 447 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 CTNNA1P35221 906 aaKnown RBP18.77■□□□□ 0.6
COL5A1-203ENST00000460264 MLLT3P42568 568 aaPredicted RBP18.77■□□□□ 0.6
COL5A1-203ENST00000460264 INHBCP55103 352 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 TLE3Q04726 772 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 PEX6Q13608 980 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 LRP8Q14114 963 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 NR1D2Q14995 579 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 FOXR1Q6PIV2 292 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 SPACA3Q8IXA5 215 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 NAGSQ8N159 534 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 ARL14Q8N4G2 192 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 CALR3Q96L12 384 aaKnown RBP18.77■□□□□ 0.6
COL5A1-203ENST00000460264 TMEM74Q96NL1 305 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 STRADBQ9C0K7 418 aa18.77■□□□□ 0.6
COL5A1-203ENST00000460264 NFKBIL1Q9UBC1 381 aaPredicted RBP18.77■□□□□ 0.6
COL5A1-203ENST00000460264 ATXN7L1Q9ULK2 861 aaPredicted RBP18.77■□□□□ 0.6
COL5A1-203ENST00000460264 RHPN2P1A8MT19 583 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 CDRT15L2A8MXV6 281 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 TMX2-CTNND1H3BSU7 103 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 COPS2P61201 443 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 B4GALNT1Q00973 533 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 EIF3IQ13347 325 aaKnown RBP18.76■□□□□ 0.59
COL5A1-203ENST00000460264 ALS2CLQ60I27 953 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 KDELC1Q6UW63 502 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 TMC3Q7Z5M5 1100 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 CLEC14AQ86T13 490 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 ZNF567Q8N184 647 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 GPR26Q8NDV2 337 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 ACRBPQ8NEB7 543 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 HTR3CQ8WXA8 447 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 VAT1Q99536 393 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 HERPUD2Q9BSE4 406 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 HEMGNQ9BXL5 484 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 GPR63Q9BZJ6 419 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 LACRTQ9GZZ8 138 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 KLHL8Q9P2G9 620 aaPredicted RBP18.76■□□□□ 0.59
COL5A1-203ENST00000460264 FAM153AQ9UHL3 310 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 ZNHIT2Q9UHR6 403 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 PRKAB1Q9Y478 270 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 PCDHA3Q9Y5H8 950 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 SPO11Q9Y5K1 396 aa18.76■□□□□ 0.59
COL5A1-203ENST00000460264 HACD1B0YJ81 288 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 APOC4-APOC2K7ER74 178 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 PLD2O14939 933 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 TNFSF15O95150 251 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 APOC2P02655 101 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 VAV2P52735 878 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 WNT3AP56704 352 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 ZFP36L1Q07352 338 aaKnown RBP18.75■□□□□ 0.59
COL5A1-203ENST00000460264 ZNF569Q5MCW4 686 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 CCDC70Q6NSX1 233 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 RAB11FIP2Q7L804 512 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 TMPRSS9Q7Z410 1059 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 OXNAD1Q96HP4 312 aaPredicted RBP18.75■□□□□ 0.59
COL5A1-203ENST00000460264 NAF1Q96HR8 494 aaKnown RBP18.75■□□□□ 0.59
COL5A1-203ENST00000460264 ZSCAN5AQ9BUG6 496 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 SPATA16Q9BXB7 569 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 RMI1Q9H9A7 625 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 RAD18Q9NS91 495 aa18.75■□□□□ 0.59
COL5A1-203ENST00000460264 LOC285095A0A1B0GVY8 99 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 F5H423 210 aaPredicted RBP18.74■□□□□ 0.59
COL5A1-203ENST00000460264 PJA2O43164 708 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 B4GAT1O43505 415 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 ITGA2BP08514 1039 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 ALDH4A1P30038 563 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 PTPN7P35236 360 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 NAP1L1P55209 391 aaKnown RBP18.74■□□□□ 0.59
COL5A1-203ENST00000460264 OR1D5P58170 312 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 XRCC4Q13426 336 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 NOMO1Q15155 1222 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 MAP9Q49MG5 647 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 CHST15Q7LFX5 561 aaPredicted RBP18.74■□□□□ 0.59
COL5A1-203ENST00000460264 TMEM139Q8IV31 216 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 SLITRK4Q8IW52 837 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 FBXO39Q8N4B4 442 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 TRAM1L1Q8N609 369 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 LRRC57Q8N9N7 239 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 KCNE4Q8WWG9 221 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 FCRL5Q96RD9 977 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 SRPK1Q96SB4 655 aaKnown RBP18.74■□□□□ 0.59
COL5A1-203ENST00000460264 BAG1Q99933 345 aaPredicted RBP18.74■□□□□ 0.59
COL5A1-203ENST00000460264 PRORYQ9H606 182 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 RDH14Q9HBH5 336 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 EFR3BQ9Y2G0 817 aa18.74■□□□□ 0.59
COL5A1-203ENST00000460264 ZNF106Q9H2Y7 1883 aaKnown RBP18.73■□□□□ 0.59
COL5A1-203ENST00000460264 CCDC66A2RUB6 948 aa18.73■□□□□ 0.59
COL5A1-203ENST00000460264 GRID2IPA4D2P6 1211 aa18.73■□□□□ 0.59
COL5A1-203ENST00000460264 AURKAO14965 403 aa18.73■□□□□ 0.59
COL5A1-203ENST00000460264 PPM1DO15297 605 aa18.73■□□□□ 0.59
COL5A1-203ENST00000460264 CPNE6O95741 557 aa18.73■□□□□ 0.59
COL5A1-203ENST00000460264 EML2O95834 649 aa18.73■□□□□ 0.59
COL5A1-203ENST00000460264 EPOP01588 193 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms