RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ATP1A1P05023 1023 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 CTBSQ01459 385 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 HLTFQ14527 1009 aaKnown RBP eCLIP15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 TCEA2Q15560 299 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 PARP6Q2NL67 630 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 HS1BP3Q53T59 392 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 PDPK2PQ6A1A2 396 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 ITPRIPL1Q6GPH6 555 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 CCDC70Q6NSX1 233 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 EFL1Q7Z2Z2 1120 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 ATG4AQ8WYN0 398 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 PLEKHG4BQ96PX9 1271 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 TMEM121Q9BTD3 319 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 GPR63Q9BZJ6 419 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 RAD18Q9NS91 495 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 HACD3Q9P035 362 aa15.98■□□□□ 0.15
SCAMP4-205ENST00000452128 CACNA1BQ00975 2339 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 COL27A1Q8IZC6 1860 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 ANKRD11Q6UB99 2663 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 CPED1A4D0V7 1026 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 GOLGA6CA6NDK9 693 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 GOLGA6BA6NDN3 693 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 TMEM8BA6NDV4 472 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 GOLGA6L9A6NEM1 432 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 CHUKO15111 745 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 GOLGA6DP0CG33 693 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 JUPP14923 745 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 PSMA3P25788 255 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 AK4P27144 223 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 GNPDA1P46926 289 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 RPIAP49247 311 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 KHDC1Q4VXA5 237 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 TAF8Q7Z7C8 310 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 ADGRG6Q86SQ4 1221 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 FAM46DQ8NEK8 389 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 SCG3Q8WXD2 468 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 NAT6Q93015 286 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 C19orf43Q9BQ61 176 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 ZSCAN5AQ9BUG6 496 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 FICDQ9BVA6 458 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 FRMD8P1Q9BZ68 369 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 GOLGA6AQ9NYA3 693 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 TAAR2Q9P1P5 351 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 ATXN10Q9UBB4 475 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 APPL1Q9UKG1 709 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 AAR2Q9Y312 384 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 ACACAQ13085 2346 aa15.97■□□□□ 0.15
SCAMP4-205ENST00000452128 A0A1W2PNU3 283 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 A6NCN8 305 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 NUAK1O60285 661 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 STIP1P31948 543 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 PTPRCAPQ14761 206 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 RTP5Q14D33 572 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 CERCAMQ5T4B2 595 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 DRICH1Q6PGQ1 229 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 DOK6Q6PKX4 331 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 ZNF438Q7Z4V0 828 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 PDCD7Q8N8D1 485 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 TRIM58Q8NG06 486 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 GLMNQ92990 594 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 GLYATL1Q969I3 302 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 VPS35Q96QK1 796 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 OR2M4Q96R27 311 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 RMI1Q9H9A7 625 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 TRIM39Q9HCM9 518 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 BPIFA1Q9NP55 256 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 GULP1Q9UBP9 304 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 CLCA2Q9UQC9 943 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 KCTD3Q9Y597 815 aa15.96■□□□□ 0.15
SCAMP4-205ENST00000452128 A0A1W2PQM1 296 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 STK10O94804 968 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 EML2O95834 649 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 PNLIPP16233 465 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 ZNF8P17098 575 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 CLCNKAP51800 687 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 PDX1P52945 283 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 XIAPP98170 497 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 SPARCL1Q14515 664 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 NR1D2Q14995 579 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 CCNG2Q16589 344 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 ATP13A5Q4VNC0 1218 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 C14orf28Q4W4Y0 310 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 ZNF648Q5T619 568 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 ALS2CLQ60I27 953 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 ZNF547Q8IVP9 402 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 NAGSQ8N159 534 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 BRSK1Q8TDC3 778 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 C1orf54Q8WWF1 131 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 APOL2Q9BQE5 337 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 FERMT1Q9BQL6 677 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 SPATA16Q9BXB7 569 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 GSDMCQ9BYG8 508 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 NRSN2Q9GZP1 204 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 EVA1BQ9NVM1 165 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 SIRPGQ9P1W8 387 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 MOSPD1Q9UJG1 213 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 BPTFQ12830 3046 aa15.95■□□□□ 0.14
SCAMP4-205ENST00000452128 PKD1L2Q7Z442 2459 aa15.94■□□□□ 0.14
SCAMP4-205ENST00000452128 AGAP14A8MT82 685 aa15.94■□□□□ 0.14
SCAMP4-205ENST00000452128 LDB2O43679 373 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms