RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 NAGSQ8N159 534 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 SPATA22Q8NHS9 363 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 PATE1Q8WXA2 126 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 TEKT5Q96M29 485 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 PANX2Q96RD6 677 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 TRIB3Q96RU7 358 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 WDR24Q96S15 920 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 SRPK1Q96SB4 655 aaKnown RBP15.16■□□□□ 0.02
CHD3-205ENST00000449744 SPATA16Q9BXB7 569 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 DPH1Q9BZG8 443 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 PRORYQ9H606 182 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 MAGEE1Q9HCI5 957 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 KLHL8Q9P2G9 620 aaPredicted RBP15.16■□□□□ 0.02
CHD3-205ENST00000449744 ZNF711Q9Y462 761 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 EPN1Q9Y6I3 576 aaPredicted RBP15.16■□□□□ 0.02
CHD3-205ENST00000449744 WDFY3Q8IZQ1 3526 aa15.16■□□□□ 0.02
CHD3-205ENST00000449744 hCG_1818297A0A087WSY0 165 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 FADS2P1A8MWK0 482 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 CDRT15L2A8MXV6 281 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 B4GAT1O43505 415 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 CPNE6O95741 557 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 NDST3O95803 873 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 MT-CYBP00156 380 aaPredicted RBP15.15■□□□□ 0.02
CHD3-205ENST00000449744 UGT1A5P35504 534 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 TMPRSS3P57727 454 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 OR1D5P58170 312 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 ZNF569Q5MCW4 686 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 PHF19Q5T6S3 580 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 CCDC181Q5TID7 509 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 GPR155Q7Z3F1 870 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 JAMLQ86YT9 394 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 TMEM159Q96B96 161 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 HAUS1Q96CS2 278 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 CALR3Q96L12 384 aaKnown RBP15.15■□□□□ 0.02
CHD3-205ENST00000449744 CMKLR1Q99788 373 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 RBSNQ9H1K0 784 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 RMI1Q9H9A7 625 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 WDR70Q9NW82 654 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 UBP1Q9NZI7 540 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.15■□□□□ 0.02
CHD3-205ENST00000449744 AKAP7Q9P0M2 348 aaPredicted RBP15.15■□□□□ 0.02
CHD3-205ENST00000449744 PISDQ9UG56 409 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 FAM153AQ9UHL3 310 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 CNOT6Q9ULM6 557 aaKnown RBP15.15■□□□□ 0.02
CHD3-205ENST00000449744 LOXL2Q9Y4K0 774 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 ST14Q9Y5Y6 855 aa15.15■□□□□ 0.02
CHD3-205ENST00000449744 OAS3Q9Y6K5 1087 aaKnown RBP15.15■□□□□ 0.02
CHD3-205ENST00000449744 ARHGEF17Q96PE2 2063 aaPredicted RBP15.15■□□□□ 0.02
CHD3-205ENST00000449744 SOWAHDA6NJG2 315 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 AGRPO00253 132 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 DNAJC6O75061 913 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 NDUFA10O95299 355 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 HGFP14210 728 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 NFKB1P19838 968 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 GPR3P46089 330 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 MARCKSL1P49006 195 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 PPM1FP49593 454 aaPredicted RBP15.14■□□□□ 0.01
CHD3-205ENST00000449744 ZFP36L1Q07352 338 aaKnown RBP15.14■□□□□ 0.01
CHD3-205ENST00000449744 NR1D2Q14995 579 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 CLPPQ16740 277 aaPredicted RBP15.14■□□□□ 0.01
CHD3-205ENST00000449744 USP53Q70EK8 1073 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 PID1Q7Z2X4 250 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 ZNF438Q7Z4V0 828 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 TMC3Q7Z5M5 1100 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 CLEC14AQ86T13 490 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 TADA1Q96BN2 335 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 UBL7Q96S82 380 aaPredicted RBP15.14■□□□□ 0.01
CHD3-205ENST00000449744 VAT1Q99536 393 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 ZSCAN5AQ9BUG6 496 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 ZMYND15Q9H091 742 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 STN1Q9H668 368 aaKnown RBP15.14■□□□□ 0.01
CHD3-205ENST00000449744 RDH14Q9HBH5 336 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 PRKAB1Q9Y478 270 aa15.14■□□□□ 0.01
CHD3-205ENST00000449744 KIF26BQ2KJY2 2108 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 TRBV23OR9-2A0A075B6M9 112 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 HACD1B0YJ81 288 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 PPM1DO15297 605 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 GRID2O43424 1007 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 SLC25A14O95258 325 aaPredicted RBP15.13■□□□□ 0.01
CHD3-205ENST00000449744 ACP5P13686 325 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 DCDC1P59894 354 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 ADCY2Q08462 1091 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 WASHC5Q12768 1159 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 PPP2R5EQ16537 467 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 PDPK2PQ6A1A2 396 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 TRAM1L1Q8N609 369 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 GPR26Q8NDV2 337 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 HTR3CQ8WXA8 447 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 KRT35Q92764 455 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 EID2BQ96D98 161 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 SLC38A3Q99624 504 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 FERMT1Q9BQL6 677 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 HEMGNQ9BXL5 484 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 CARD9Q9H257 536 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 SEMA6CQ9H3T2 930 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 KCNK4Q9NYG8 393 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 PCDHGA7Q9Y5G6 932 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 UNC13CQ8NB66 2214 aa15.13■□□□□ 0.01
CHD3-205ENST00000449744 TEX51A0A1B0GUA7 166 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms