RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 OR2M4Q96R27 311 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 SRPK1Q96SB4 655 aaKnown RBP11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 APOL2Q9BQE5 337 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 GSDMCQ9BYG8 508 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 CDH19Q9H159 772 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 BPIFA1Q9NP55 256 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 PADI4Q9UM07 663 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 OAS3Q9Y6K5 1087 aaKnown RBP11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 RP1P56715 2156 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 ARHGEF17Q96PE2 2063 aaPredicted RBP11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 ASXL3Q9C0F0 2248 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 EME2A4GXA9 379 aaPredicted RBP11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 ZNF189O75820 626 aaPredicted RBP11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 AGTP01019 485 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 EPOP01588 193 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 BPIP17213 487 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 AK4P27144 223 aaPredicted RBP11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 ADCY8P40145 1251 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 GDF10P55107 478 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 TARDBPQ13148 414 aaKnown RBP eCLIP11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 MEI1Q5TIA1 1274 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 SLC30A9Q6PML9 568 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 GLT6D1Q7Z4J2 308 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 SLC13A5Q86YT5 568 aaPredicted RBP11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 GALNT13Q8IUC8 556 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 TTC30BQ8N4P2 665 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 TRAM1L1Q8N609 369 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 SLC35B2Q8TB61 432 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 CCDC74AQ96AQ1 378 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 CCDC3Q9BQI4 270 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 TMEM121Q9BTD3 319 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 ZSCAN5AQ9BUG6 496 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 ABCG4Q9H172 646 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 DPEP2Q9H4A9 486 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 TRABDQ9H4I3 376 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 ARFGAP3Q9NP61 516 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 RAD18Q9NS91 495 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 TRNAU1APQ9NX07 287 aaKnown RBP11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 HACD3Q9P035 362 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 NFKBIL1Q9UBC1 381 aaPredicted RBP11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 CNOT6Q9ULM6 557 aaKnown RBP11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 CLCA2Q9UQC9 943 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 PLEKHM1Q9Y4G2 1056 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 GPSM3Q9Y4H4 160 aa11.84□□□□□ -0.51
LSP1P3-201ENST00000449530 FLNBO75369 2602 aaKnown RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 TAF4O00268 1085 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 CASC3O15234 703 aaKnown RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 BUD23O43709 281 aaKnown RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 NOBOXO60393 691 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 USP12O75317 370 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 MT-CO3P00414 261 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 ACTR1BP42025 376 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 ACTR1AP61163 376 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 CTBSQ01459 385 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 CAMK2BQ13554 666 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 ZNF648Q5T619 568 aaPredicted RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 NRROSQ86YC3 692 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 PHYKPLQ8IUZ5 450 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 TAB3Q8N5C8 712 aaPredicted RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 GPR156Q8NFN8 814 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 TRIM58Q8NG06 486 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 MDM1Q8TC05 714 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 GPBAR1Q8TDU6 330 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 SCARF2Q96GP6 870 aaPredicted RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 PPP1R2P1Q96PQ5 205 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 CARD9Q9H257 536 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 SPATS2LQ9NUQ6 558 aaKnown RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 TAAR2Q9P1P5 351 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 VPS18Q9P253 973 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 AAR2Q9Y312 384 aaKnown RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 PRKAB1Q9Y478 270 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 PCYT1BQ9Y5K3 369 aaPredicted RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 ST14Q9Y5Y6 855 aa11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 SMG1Q96Q15 3661 aaKnown RBP11.83□□□□□ -0.52
LSP1P3-201ENST00000449530 LAMA5O15230 3695 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 TRABD2BA6NFA1 517 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 C5orf60A6NFR6 353 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 LIASO43766 372 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 DNAJC6O75061 913 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 CSO75390 466 aaKnown RBP11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 METTL18O95568 372 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 ADRA1AP35348 466 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 HMGCLP35914 325 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 SPAM1P38567 509 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 MAZP56270 477 aaKnown RBP11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 SNX1Q13596 522 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 SPARCL1Q14515 664 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 P3H1Q32P28 736 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 C14orf28Q4W4Y0 310 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 PYCR3Q53H96 274 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 CERCAMQ5T4B2 595 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 CDCP2Q5VXM1 449 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 PDPK2PQ6A1A2 396 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 FAM151BQ6UXP7 276 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 DCBLD1Q8N8Z6 715 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 ZDHHC1Q8WTX9 485 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 UBE2Q2Q8WVN8 375 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 C1orf54Q8WWF1 131 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 GLYATL1Q969I3 302 aa11.82□□□□□ -0.52
LSP1P3-201ENST00000449530 NXPE2Q96DL1 559 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms