RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 SCAMP4Q969E2 229 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 TADA1Q96BN2 335 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 GFM1Q96RP9 751 aaKnown RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 TRIB3Q96RU7 358 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 VAT1Q99536 393 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 FAM118BQ9BPY3 351 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 FERMT1Q9BQL6 677 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 TEX101Q9BY14 249 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 C10orf88Q9H8K7 445 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 PKD2L2Q9NZM6 624 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 RSPH14Q9UHP6 348 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 EFR3BQ9Y2G0 817 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 GCN1Q92616 2671 aaKnown RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 CFAP46Q8IYW2 2715 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 CCDC187A0A096LP49 1063 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 A0A1W2PQM1 296 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 DDX3YO15523 660 aaKnown RBP13.93□□□□□ -0.18
TREX1-202ENST00000444177 KLK10O43240 276 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 NOBOXO60393 691 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 TJP3O95049 919 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 NDST3O95803 873 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 FUCA1P04066 466 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 RPLP0P05388 317 aaKnown RBP13.93□□□□□ -0.18
TREX1-202ENST00000444177 CEACAM5P06731 702 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 TEAD1P28347 426 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 EIF3EP60228 445 aaKnown RBP13.93□□□□□ -0.18
TREX1-202ENST00000444177 CXADRP78310 365 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 DPTQ07507 201 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 CCDC70Q6NSX1 233 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 LYSMD3Q7Z3D4 306 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 B3GNT8Q7Z7M8 397 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 SFTPA2Q8IWL1 248 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 NRSN1Q8IZ57 195 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 ARL14Q8N4G2 192 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 Q8N9G6 341 aaPredicted RBP13.93□□□□□ -0.18
TREX1-202ENST00000444177 KCNE4Q8WWG9 221 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 RIOK2Q9BVS4 552 aaKnown RBP13.93□□□□□ -0.18
TREX1-202ENST00000444177 DPH1Q9BZG8 443 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 LRRN3Q9H3W5 708 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 DPEP2Q9H4A9 486 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 CARS2Q9HA77 564 aaKnown RBP13.93□□□□□ -0.18
TREX1-202ENST00000444177 FAM153AQ9UHL3 310 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 APPL1Q9UKG1 709 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 GUCA1BQ9UMX6 200 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 SHOC2Q9UQ13 582 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 ZNF711Q9Y462 761 aa13.93□□□□□ -0.18
TREX1-202ENST00000444177 TEX51A0A1B0GUA7 166 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 CDRT15L2A8MXV6 281 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 TMX2-CTNND1H3BSU7 103 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 INPP4BO15327 924 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 TNFSF15O95150 251 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 SOD1P00441 154 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 PYGLP06737 847 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 RBP3P10745 1247 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 GLB1P16278 677 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 GNPDA1P46926 289 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 SPINT3P49223 89 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 CERCAMQ5T4B2 595 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 BROXQ5VW32 411 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 ALS2CLQ60I27 953 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 DARS2Q6PI48 645 aaKnown RBP13.92□□□□□ -0.18
TREX1-202ENST00000444177 ADAMTSL4Q6UY14 1074 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 TRIM74Q86UV6 250 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 IPMKQ8NFU5 416 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 GPBAR1Q8TDU6 330 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 LIN37Q96GY3 246 aaPredicted RBP13.92□□□□□ -0.18
TREX1-202ENST00000444177 FCRL5Q96RD9 977 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 AGAP2Q99490 1192 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 FRMD8Q9BZ67 464 aaPredicted RBP13.92□□□□□ -0.18
TREX1-202ENST00000444177 GBA3Q9H227 469 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 KCNF1Q9H3M0 494 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 ZFYVE1Q9HBF4 777 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 SPATS2LQ9NUQ6 558 aaKnown RBP13.92□□□□□ -0.18
TREX1-202ENST00000444177 LRIT1Q9P2V4 623 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 TRHDEQ9UKU6 1024 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 PPP2R2CQ9Y2T4 447 aa13.92□□□□□ -0.18
TREX1-202ENST00000444177 GOLGA6L9A6NEM1 432 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 B4DGG1 531 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 D6RAR5 112 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 TK2O00142 265 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 ATXN7O15265 892 aaPredicted RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 KCNN4O15554 427 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 ZSCAN12O43309 604 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 STK10O94804 968 aaKnown RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 PNLIPP16233 465 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 MLLT3P42568 568 aaPredicted RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 POLD2P49005 469 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 UCNP55089 124 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 INHBCP55103 352 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 WNT3AP56704 352 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 TMPRSS3P57727 454 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 HLTFQ14527 1009 aaKnown RBP eCLIP13.91□□□□□ -0.18
TREX1-202ENST00000444177 C14orf28Q4W4Y0 310 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 ITPRIPL1Q6GPH6 555 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 KDELC1Q6UW63 502 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 MARK2Q7KZI7 788 aaKnown RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 RAB11FIP2Q7L804 512 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 CLEC14AQ86T13 490 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms