RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZC3H18Q86VM9 953 aaKnown RBP18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 GPR26Q8NDV2 337 aa18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 ZNF248Q8NDW4 579 aa18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 PATE1Q8WXA2 126 aa18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 CALR3Q96L12 384 aaKnown RBP18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 QKIQ96PU8 341 aaKnown RBP eCLIP18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 ATXN7L1Q9ULK2 861 aaPredicted RBP18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 SHOC2Q9UQ13 582 aa18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 ZNF711Q9Y462 761 aa18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 PCDHA3Q9Y5H8 950 aa18.77■□□□□ 0.6
HMGB3P22-201ENST00000442010 ZNF106Q9H2Y7 1883 aaKnown RBP18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 LOC285095A0A1B0GVY8 99 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 APOC4-APOC2K7ER74 178 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 MTSS1O43312 755 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 APOC2P02655 101 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 NFKB1P19838 968 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 ACTR1BP42025 376 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 MLLT3P42568 568 aaPredicted RBP18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 INHBCP55103 352 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 ACTR1AP61163 376 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 TLE3Q04726 772 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 CCDC173Q0VFZ6 552 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 GALNT13Q8IUC8 556 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 CCDC50Q8IVM0 306 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 SPACA3Q8IXA5 215 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 ZNF567Q8N184 647 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 ACRBPQ8NEB7 543 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 HAUS1Q96CS2 278 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 FCRL5Q96RD9 977 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 VAT1Q99536 393 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 FOXP3Q9BZS1 431 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 PRORYQ9H606 182 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 THSD1Q9NS62 852 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 UBP1Q9NZI7 540 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 FAM153AQ9UHL3 310 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 SPO11Q9Y5K1 396 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 ADGRG1Q9Y653 693 aa18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 SMG1Q96Q15 3661 aaKnown RBP18.76■□□□□ 0.59
HMGB3P22-201ENST00000442010 HACD1B0YJ81 288 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 TMX2-CTNND1H3BSU7 103 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 AURKAO14965 403 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 PPM1DO15297 605 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 PMPCBO75439 489 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 ASMTLO95671 621 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 CTNNA2P26232 953 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 VAV2P52735 878 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 COPS2P61201 443 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 EIF3IQ13347 325 aaKnown RBP18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 XRCC4Q13426 336 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 PEX6Q13608 980 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 LRP8Q14114 963 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 CLEC14AQ86T13 490 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 SLITRK4Q8IW52 837 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 LRRC57Q8N9N7 239 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 HTR3CQ8WXA8 447 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 OXNAD1Q96HP4 312 aaPredicted RBP18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 MRGPRX2Q96LB1 330 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 TMEM74Q96NL1 305 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 HEMGNQ9BXL5 484 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 RMI1Q9H9A7 625 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 EFR3BQ9Y2G0 817 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 SSUH2Q9Y2M2 353 aa18.75■□□□□ 0.59
HMGB3P22-201ENST00000442010 NUAK1O60285 661 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 EML2O95834 649 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 EPOP01588 193 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 HOXB3P14651 431 aaPredicted RBP18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 BPIP17213 487 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 RBMS1P29558 406 aaKnown RBP18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 PTPN7P35236 360 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 WNT3AP56704 352 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 OR1D5P58170 312 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 NOMO1Q15155 1222 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 RAB11FIP2Q7L804 512 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 TRAM1L1Q8N609 369 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 SRPK1Q96SB4 655 aaKnown RBP18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 ZSCAN5AQ9BUG6 496 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 EPB41L5Q9HCM4 733 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 KLHL8Q9P2G9 620 aaPredicted RBP18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 ATXN10Q9UBB4 475 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 PRKAB1Q9Y478 270 aa18.74■□□□□ 0.59
HMGB3P22-201ENST00000442010 GRID2IPA4D2P6 1211 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 RHPN2P1A8MT19 583 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 PLD2O14939 933 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 TNFSF15O95150 251 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 IPO7O95373 1038 aaKnown RBP18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 ITGA2BP08514 1039 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 UGT1A5P35504 534 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 GPR3P46089 330 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 ALS2CLQ60I27 953 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 PDPK2PQ6A1A2 396 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 ZNF574Q6ZN55 896 aaPredicted RBP18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 PID1Q7Z2X4 250 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 SFRP1Q8N474 314 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 ALG3Q92685 438 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 NAF1Q96HR8 494 aaKnown RBP18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 BAG1Q99933 345 aaPredicted RBP18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 GORASP1Q9BQQ3 440 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 SPATA16Q9BXB7 569 aa18.73■□□□□ 0.59
HMGB3P22-201ENST00000442010 OSBPL8Q9BZF1 889 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms